RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 ITGA8P53708 1063 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 DENND1BQ6P3S1 775 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 FICDQ9BVA6 458 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 RMND5AQ9H871 391 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 PCMTD2Q9NV79 361 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 ZNF862O60290 1169 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 PRLRP16471 622 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 PPP1R15BQ5SWA1 713 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 IFNL1Q8IU54 200 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 MCOLN2Q8IZK6 566 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 PNMA5Q96PV4 448 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 NR1H4Q96RI1 486 aaPredicted RBP10.12□□□□□ -0.79
SCAF11-202ENST00000369367 ESYT3A0FGR9 886 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 FZD9O00144 591 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 EML1O00423 815 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 GUCY1B2O75343 617 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 WSCD1Q658N2 575 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 LRRC8EQ6NSJ5 796 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 CTU1Q7Z7A3 348 aaKnown RBP10.12□□□□□ -0.79
SCAF11-202ENST00000369367 LCA5Q86VQ0 697 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 SLC22A9Q8IVM8 553 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 MAML3Q96JK9 1138 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 TUBGCP4Q9UGJ1 667 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.12□□□□□ -0.79
SCAF11-202ENST00000369367 HPGDP15428 266 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 OTUD4Q01804 1114 aaKnown RBP10.12□□□□□ -0.79
SCAF11-202ENST00000369367 C1orf146Q5VVC0 180 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 DEFB106AQ8N104 65 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.12□□□□□ -0.79
SCAF11-202ENST00000369367 PHC3Q8NDX5 983 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 LPCAT1Q8NF37 534 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 CDT1Q9H211 546 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 MRPL46Q9H2W6 279 aaKnown RBP10.12□□□□□ -0.79
SCAF11-202ENST00000369367 VIPAS39Q9H9C1 493 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 SYNDIG1LA6NDD5 238 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 NFATC1O95644 943 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 HSPA1AP0DMV8 641 aaKnown RBP10.12□□□□□ -0.79
SCAF11-202ENST00000369367 HSPA1BP0DMV9 641 aaKnown RBP10.12□□□□□ -0.79
SCAF11-202ENST00000369367 MLNP12872 115 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 PTPN7P35236 360 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 SOX10P56693 466 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 LRRC74AQ0VAA2 488 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 TRIM68Q6AZZ1 485 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 ANO5Q75V66 913 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 TRMT11Q7Z4G4 463 aaKnown RBP10.12□□□□□ -0.79
SCAF11-202ENST00000369367 PLEKHA8Q96JA3 519 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 ZFP42Q96MM3 310 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 BRD9Q9H8M2 597 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 FAM153AQ9UHL3 310 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 DCTN4Q9UJW0 460 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 CRYL1Q9Y2S2 319 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 Q9Y3F1 56 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 A0A1W2PQ67 120 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 SLCO1B7G3V0H7 640 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 ZSCAN9O15535 394 aaPredicted RBP10.12□□□□□ -0.79
SCAF11-202ENST00000369367 EOMESO95936 686 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 AP2B1P63010 937 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 AGBL2Q5U5Z8 902 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 C16orf89Q6UX73 402 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 B3GALNT2Q8NCR0 500 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 GLMNQ92990 594 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 C9orf72Q96LT7 481 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 ULBP1Q9BZM6 244 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 C11orf49Q9H6J7 331 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 TMEM161AQ9NX61 479 aa10.12□□□□□ -0.79
SCAF11-202ENST00000369367 LGR5O75473 907 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 TSHZ1Q6ZSZ6 1077 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 BBS7Q8IWZ6 715 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 C7orf61Q8IZ16 206 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 ROBO3Q96MS0 1386 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 A0A087X0T9 212 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 FAM228BP0C875 321 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 AIF1P55008 147 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 MAPK7Q13164 816 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 NFIL3Q16649 462 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 ANKRD52Q8NB46 1076 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 ARMC2Q8NEN0 867 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 CEP19Q96LK0 163 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 ISCUQ9H1K1 167 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 ATP13A3Q9H7F0 1226 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 ZDHHC4Q9NPG8 344 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 STOML1Q9UBI4 398 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 BAZ2BQ9UIF8 2168 aaKnown RBP10.11□□□□□ -0.79
SCAF11-202ENST00000369367 TSPAN3O60637 253 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 GLI1P08151 1106 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 FGRP09769 529 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 GPC1P35052 558 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 MMP13P45452 471 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 DNAL1Q4LDG9 190 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 PTF1AQ7RTS3 328 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 SLC47A2Q86VL8 602 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 CASZ1Q86V15 1759 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 TRIM16O95361 564 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 KRT6AP02538 564 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 KRT6BP04259 564 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 ITGB6P18564 788 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 SOAT1P35610 550 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 KRT6CP48668 564 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 MAPK8IP2Q13387 824 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-202ENST00000369367 KRT78Q8N1N4 520 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms