RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 LSM11P83369 360 aaKnown RBP eCLIP5.87□□□□□ -1.47
CD47-201ENST00000355354 BNIP1Q12981 228 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 ZNF268Q14587 947 aaPredicted RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 WLSQ5T9L3 541 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 SNRNP48Q6IEG0 339 aaKnown RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 THNSL1Q8IYQ7 743 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 TCP10LQ8TDR4 215 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 MFSD3Q96ES6 412 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 ASB2Q96Q27 587 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 OR52B2Q96RD2 323 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 DEF6Q9H4E7 631 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 GABBR1Q9UBS5 961 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 SLC7A8Q9UHI5 535 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 CDH22Q9UJ99 828 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 HOOK1Q9UJC3 728 aaKnown RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 INPP5FQ9Y2H2 1132 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 TICRRQ7Z2Z1 1910 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 ARVCFO00192 962 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 PITPNM1O00562 1244 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 LDHCP07864 332 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 PSMC3P17980 439 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 SOX5P35711 763 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 LTBRP36941 435 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 ARHGAP1Q07960 439 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 GNPTABQ3T906 1256 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 TSTD2Q5T7W7 516 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 TRIM68Q6AZZ1 485 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 TMEM270Q6UE05 265 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 FAM178BQ8IXR5 827 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 HS3ST5Q8IZT8 346 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 RBM15BQ8NDT2 890 aaKnown RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 IFT122Q9HBG6 1241 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 FAM49BQ9NUQ9 324 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 CPSF2Q9P2I0 782 aaKnown RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 SUFUQ9UMX1 484 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 ANKRD17O75179 2603 aaKnown RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 RFPL1O75677 317 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 CAVIN2O95810 425 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 VTNP04004 478 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 EPB41P11171 864 aaKnown RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 P4HA1P13674 534 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 SYN1P17600 705 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 KRT4P19013 534 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 RPL22P35268 128 aaKnown RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 MARCH8Q5T0T0 291 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 FRMD7Q6ZUT3 714 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 RSPH3Q86UC2 560 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 ELOA2Q8IYF1 753 aaPredicted RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 CCDC170Q8IYT3 715 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 PARP8Q8N3A8 854 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 CNTD1Q8N815 330 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 FAM76AQ8TAV0 307 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 DPF3Q92784 378 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 PANX3Q96QZ0 392 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 SLC29A1Q99808 456 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 NCAPGQ9BPX3 1015 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 EIF2AQ9BY44 585 aaKnown RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 ELOVL4Q9GZR5 314 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 GBP3Q9H0R5 595 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 GOPCQ9HD26 462 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 KLK14Q9P0G3 267 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 TECTAO75443 2155 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 GOLGA8QA0A0J9YX86 632 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 GOLGA8OA6NCC3 632 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 GOLGA8NF8WBI6 632 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 DLL1O00548 723 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 KPNA6O60684 536 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 SOAT2O75908 522 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 ZBTB11O95625 1053 aaPredicted RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 ERBB2P04626 1255 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 SRGAP2CP0DJJ0 459 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 BRAFP15056 766 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 ADSLP30566 484 aaPredicted RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 MLH1P40692 756 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 CSE1LP55060 971 aaKnown RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 IKQ13123 557 aaPredicted RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 PCDH19Q8TAB3 1148 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 CCDC17Q96LX7 622 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 BARD1Q99728 777 aaKnown RBP5.87□□□□□ -1.47
CD47-201ENST00000355354 OMDQ99983 421 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 YIPF3Q9GZM5 350 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 CHMP2BQ9UQN3 213 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 OTOGLQ3ZCN5 2332 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 C7orf72A4D263 438 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 GPR37L1O60883 481 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 GNAT2P19087 354 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 KCNA4P22459 653 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 CTNNA2P26232 953 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 CIITAP33076 1130 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 PTPN11Q06124 597 aaPredicted RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 CBX2Q14781 532 aaPredicted RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 ZACNQ401N2 412 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 MTERF2Q49AM1 385 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 CFAP58Q5T655 872 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 RAPH1Q70E73 1250 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 CLNKQ7Z7G1 428 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 GALNT10Q86SR1 603 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 TMEM173Q86WV6 379 aaPredicted RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 C10orf82Q8WW14 230 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 HEXIM2Q96MH2 286 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms