RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SND1Q7KZF4 910 aaKnown RBP eCLIP15.27■□□□□ 0.04
CXCL12-201ENST00000343575 ADAT2Q7Z6V5 191 aaKnown RBP15.27■□□□□ 0.04
CXCL12-201ENST00000343575 TAC4Q86UU9 113 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 RCOR2Q8IZ40 523 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 CASP10Q92851 521 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 FBXO32Q969P5 355 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 CEP295NLQ96MC4 621 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 ENTPD7Q9NQZ7 604 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 COMMD8Q9NX08 183 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 MTMR10Q9NXD2 777 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 INSL5Q9Y5Q6 135 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 LRRD1A4D1F6 860 aa15.27■□□□□ 0.03
CXCL12-201ENST00000343575 KRT10P13645 584 aa15.27■□□□□ 0.03
CXCL12-201ENST00000343575 IL4RP24394 825 aa15.27■□□□□ 0.03
CXCL12-201ENST00000343575 NME3Q13232 169 aa15.27■□□□□ 0.03
CXCL12-201ENST00000343575 BOLA3Q53S33 107 aa15.27■□□□□ 0.03
CXCL12-201ENST00000343575 SEL1L2Q5TEA6 688 aa15.27■□□□□ 0.03
CXCL12-201ENST00000343575 SPOCD1Q6ZMY3 1216 aa15.27■□□□□ 0.03
CXCL12-201ENST00000343575 TEKT4Q8WW24 435 aa15.27■□□□□ 0.03
CXCL12-201ENST00000343575 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.27■□□□□ 0.032e-6■■■□□ 18.6
CXCL12-201ENST00000343575 HSPH1Q92598 858 aa15.27■□□□□ 0.03
CXCL12-201ENST00000343575 MYRFLQ96LU7 910 aa15.27■□□□□ 0.03
CXCL12-201ENST00000343575 HEMGNQ9BXL5 484 aa15.27■□□□□ 0.03
CXCL12-201ENST00000343575 CERS4Q9HA82 394 aa15.27■□□□□ 0.03
CXCL12-201ENST00000343575 DDX56Q9NY93 547 aaKnown RBP15.27■□□□□ 0.03
CXCL12-201ENST00000343575 SYNJ2BP-COX16A0A087WUM0 186 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.26■□□□□ 0.03
CXCL12-201ENST00000343575 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.26■□□□□ 0.03
CXCL12-201ENST00000343575 H3BNC9 293 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 MDM4O15151 490 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 FSBPO95073 299 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 CA8P35219 290 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 RDXP35241 583 aaKnown RBP15.26■□□□□ 0.03
CXCL12-201ENST00000343575 DEUP1Q05D60 604 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 TWF1Q12792 350 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 ERMARDQ5T6L9 678 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 BTBD8Q5XKL5 378 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 PRELID2Q8N945 189 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 OSBPL8Q9BZF1 889 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.26■□□□□ 0.03
CXCL12-201ENST00000343575 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.26■□□□□ 0.03
CXCL12-201ENST00000343575 DDIT4Q9NX09 232 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 RRN3Q9NYV6 651 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 COX16Q9P0S2 106 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 STIM2Q9P246 746 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 SFMBT1Q9UHJ3 866 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 FBXW11Q9UKB1 542 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 MAFFQ9ULX9 164 aa15.26■□□□□ 0.03
CXCL12-201ENST00000343575 MAGED2Q9UNF1 606 aaPredicted RBP15.26■□□□□ 0.03
CXCL12-201ENST00000343575 hCG_1818297A0A087WSY0 165 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 PRRG1O14668 218 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 TBX18O95935 607 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 ADH1AP07327 375 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 PTPN7P35236 360 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 CXCR3P49682 368 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 CLCN4P51793 760 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 MMRN1Q13201 1228 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 MSANTD2Q6P1R3 559 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 TMEM150AQ86TG1 271 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 PYROXD2Q8N2H3 581 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 RBM41Q96IZ5 413 aaKnown RBP15.25■□□□□ 0.03
CXCL12-201ENST00000343575 NKX2-4Q9H2Z4 354 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 SMOC2Q9H3U7 446 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 CLIC5Q9NZA1 410 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 FZD10Q9ULW2 581 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 ATG2AQ2TAZ0 1938 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 EPOPA6NHQ4 379 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 KRIT1O00522 736 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 IRAK2O43187 625 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 MSI1O43347 362 aaKnown RBP15.25■□□□□ 0.03
CXCL12-201ENST00000343575 KLRC2P26717 231 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 HNRNPH1P31943 449 aaKnown RBP15.25■□□□□ 0.03
CXCL12-201ENST00000343575 L1CAMP32004 1257 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 ALDH1A3P47895 512 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 LIG3P49916 1009 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 COPS2P61201 443 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 DPYSL3Q14195 570 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 DPYSL2Q16555 572 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 KCTD19Q17RG1 926 aaPredicted RBP15.25■□□□□ 0.03
CXCL12-201ENST00000343575 DNAJB7Q7Z6W7 309 aaPredicted RBP15.25■□□□□ 0.03
CXCL12-201ENST00000343575 CCDC50Q8IVM0 306 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 IFT20Q8IY31 132 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 MREGQ8N565 214 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 CABS1Q96KC9 395 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 SAMD11Q96NU1 681 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 PCDH18Q9HCL0 1135 aa15.25■□□□□ 0.03
CXCL12-201ENST00000343575 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.25■□□□□ 0.03
CXCL12-201ENST00000343575 MTCL1Q9Y4B5 1905 aaKnown RBP15.24■□□□□ 0.03
CXCL12-201ENST00000343575 CSH1P0DML2 217 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 CSH2P0DML3 217 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 MYBL2P10244 700 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 ELF1P32519 619 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 BMP8BP34820 402 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 ADRA1BP35368 520 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 CDH6P55285 790 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 MRPS25P82663 173 aaKnown RBP15.24■□□□□ 0.03
CXCL12-201ENST00000343575 GPM6BQ13491 265 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 PPP2R5EQ16537 467 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 TFDP3Q5H9I0 405 aa15.24■□□□□ 0.03
CXCL12-201ENST00000343575 ZFYVE27Q5T4F4 411 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms