RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 EMC1Q8N766 993 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 PKD2L2Q9NZM6 624 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 ADGRA3Q8IWK6 1321 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 PRR5-ARHGAP8B1AHC4 643 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 TM9SF1O15321 606 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 NOL4O94818 638 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 SERPINB5P36952 375 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 ARHGAP8P85298 464 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 TREML1Q86YW5 311 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 C10orf82Q8WW14 230 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 ERAP1Q9NZ08 941 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 SNX5Q9Y5X3 404 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 FBP2O00757 339 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 ZC3H11AO75152 810 aaKnown RBP eCLIP16.52■□□□□ 0.23
NPHP3-201ENST00000337331 SLITRK3O94933 977 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 JAK1P23458 1154 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 MGAT5Q09328 741 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 KCNA1Q09470 495 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 ZCCHC23Q6ZST2 131 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 KBTBD2Q8IY47 623 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 DNAJC16Q9Y2G8 782 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 ZNF510Q9Y2H8 683 aa16.52■□□□□ 0.23
NPHP3-201ENST00000337331 IL10P22301 178 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 MSX2P35548 267 aaPredicted RBP16.51■□□□□ 0.23
NPHP3-201ENST00000337331 CCNG2Q16589 344 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 GOLGA7BQ2TAP0 167 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 PDCD2LQ9BRP1 358 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 SLC24A2Q9UI40 661 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 M0R3G1 203 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 CTSHP09668 335 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 GMPSP49915 693 aaPredicted RBP16.51■□□□□ 0.23
NPHP3-201ENST00000337331 GPR107Q5VW38 600 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 TRAF7Q6Q0C0 670 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 ADCK1Q86TW2 530 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 PPHLN1Q8NEY8 458 aaKnown RBP16.51■□□□□ 0.23
NPHP3-201ENST00000337331 SLC7A14Q8TBB6 771 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 ZC3H15Q8WU90 426 aaKnown RBP16.51■□□□□ 0.23
NPHP3-201ENST00000337331 DACH2Q96NX9 599 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 MMTAG2Q9BU76 263 aaKnown RBP16.51■□□□□ 0.23
NPHP3-201ENST00000337331 FRMD8Q9BZ67 464 aaPredicted RBP16.51■□□□□ 0.23
NPHP3-201ENST00000337331 ZMYM2Q9UBW7 1377 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 PIK3CDO00329 1044 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 EML1O00423 815 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 CPB1P15086 417 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 PORP16435 677 aaPredicted RBP16.51■□□□□ 0.23
NPHP3-201ENST00000337331 PTGER2P43116 358 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 RECQLP46063 649 aaPredicted RBP16.51■□□□□ 0.23
NPHP3-201ENST00000337331 CYP24A1Q07973 514 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 C6orf52Q5T4I8 152 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 EXD1Q8NHP7 514 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 RSPH1Q8WYR4 309 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 DCUN1D1Q96GG9 259 aa16.51■□□□□ 0.23
NPHP3-201ENST00000337331 DDX4Q9NQI0 724 aaKnown RBP16.51■□□□□ 0.23
NPHP3-201ENST00000337331 ANGPT2O15123 496 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 IL1R1P14778 569 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 FGFR3P22607 806 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 ADAM17P78536 824 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 C11orf63Q6NUN7 778 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 AAGABQ6PD74 315 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 ZBTB49Q6ZSB9 765 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 CCDC33Q8N5R6 958 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 NKX2-3Q8TAU0 364 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 NRG4Q8WWG1 115 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 SLC7A8Q9UHI5 535 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 SLC39A10Q9ULF5 831 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 BTNL10A8MVZ5 291 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 ATXN8OSP0DMR3 200 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 CLCN3P51790 818 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 CASP5P51878 434 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 RSBN1Q5VWQ0 802 aaPredicted RBP16.5■□□□□ 0.23
NPHP3-201ENST00000337331 C4orf19Q8IY42 314 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 ZSCAN18Q8TBC5 510 aaPredicted RBP16.5■□□□□ 0.23
NPHP3-201ENST00000337331 FNDC8Q8TC99 324 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 SGF29Q96ES7 293 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 PCDH12Q9NPG4 1184 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 NDFIP2Q9NV92 336 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 SLC17A7Q9P2U7 560 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 E9PBE3 544 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 DAB2P98082 770 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 PCSK7Q16549 785 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 GLRA4Q5JXX5 417 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 C6orf10Q5SRN2 563 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 ATPAF2Q8N5M1 289 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 CHST13Q8NET6 341 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 IPMKQ8NFU5 416 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 SYTL5Q8TDW5 730 aaPredicted RBP16.5■□□□□ 0.23
NPHP3-201ENST00000337331 SNX19Q92543 992 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 TRIM62Q9BVG3 475 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 GANQ9H2C0 597 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 MOSPD1Q9UJG1 213 aa16.5■□□□□ 0.23
NPHP3-201ENST00000337331 SOX11P35716 441 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 MYL6P60660 151 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 SFT2D3Q587I9 215 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 OTOP1Q7RTM1 612 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 DIS3LQ8TF46 1054 aaKnown RBP16.49■□□□□ 0.23
NPHP3-201ENST00000337331 TRIM39Q9HCM9 518 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 CISHQ9NSE2 258 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 GPATCH2LQ9NWQ4 482 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 CDY2AQ9Y6F7 541 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 CDY1Q9Y6F8 540 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms