RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TDRD5Q8NAT2 981 aaKnown RBP17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 KYQ8NBH2 561 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 RIN3Q8TB24 985 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 TRAPPC12Q8WVT3 735 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 OXNAD1Q96HP4 312 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 EIF3LQ9Y262 564 aaKnown RBP17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 FER1L4A9Z1Z3 1794 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 RNF103O00237 685 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 GJB6O95452 261 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 HNRNPCP07910 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 GLRA2P23416 452 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 RENBPP51606 427 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 EVX2Q03828 476 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 DMC1Q14565 340 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 SLC45A4Q5BKX6 768 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 SPANXN3Q5MJ09 141 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 MARC1Q5VT66 337 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 PHF13Q86YI8 300 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 THUMPD3Q9BV44 507 aaKnown RBP17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 PDGFCQ9NRA1 345 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 NFASCO94856 1347 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 H7C4K7 107 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 ZNF286BP0CG31 522 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 IRF1P10914 325 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 PTPRAP18433 802 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 SGO1Q5FBB7 561 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 AADACL2Q6P093 401 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 TPBGLP0DKB5 382 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 TSHRP16473 764 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 SLC1A6P48664 564 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 DAB2P98082 770 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 TATDN1Q6P1N9 297 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 DEFB106AQ8N104 65 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 SCN3BQ9NY72 215 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 KIF1AQ12756 1690 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 RBL1P28749 1068 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 ALDH7A1P49419 539 aaKnown RBP17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 CACHD1Q5VU97 1274 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 UNC93AQ86WB7 457 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 INPP5DQ92835 1189 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 CPNE1Q99829 537 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 MMADHCQ9H3L0 296 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 TMEM51Q9NW97 253 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 CYP39A1Q9NYL5 469 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 VTI1BQ9UEU0 232 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 PCDHB7Q9Y5E2 793 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 A0A096LPK6 155 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 MYO1GB0I1T2 1018 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 KCNK1O00180 336 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 LIASO43766 372 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 GLP2RO95838 553 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 CSHL1Q14406 222 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 PAN2Q504Q3 1202 aaKnown RBP17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 POLNQ7Z5Q5 900 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 DEFB107AQ8IZN7 70 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 ART4Q93070 314 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 TMEM169Q96HH4 297 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 UBXN6Q9BZV1 441 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 RAD54BQ9Y620 910 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 ERI2A8K979 691 aaKnown RBP17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 XPO1O14980 1071 aaKnown RBP17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 CHADO15335 359 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 SOX11P35716 441 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 SREBF2Q12772 1141 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 OPTNQ96CV9 577 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 ASCC2Q9H1I8 757 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 DNAJC5Q9H3Z4 198 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 NRDE2Q9H7Z3 1164 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 UBP1Q9NZI7 540 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 TNFSF13BQ9Y275 285 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 STARD13Q9Y3M8 1113 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 HNRNPCL2B2RXH8 293 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 PLA2G6O60733 806 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 HOXC6P09630 235 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 ZSCAN5DPP0CG00 497 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 PSMC3P17980 439 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 MGAT1P26572 445 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 MARCKSL1P49006 195 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 OXCT1P55809 520 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 FCGRTP55899 365 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 POLD3Q15054 466 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 CRY2Q49AN0 593 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 BBS12Q6ZW61 710 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 ILDR2Q71H61 639 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 P3H2Q8IVL5 708 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 SLC2A14Q8TDB8 520 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 LRCH1Q9Y2L9 728 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 SNX13Q9Y5W8 968 aa17.54■□□□□ 0.4
TRAPPC11-201ENST00000334690 MROH7Q68CQ1 1323 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 BCL9LQ86UU0 1499 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 OPLAHO14841 1288 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 PLSCR1O15162 318 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 CHRNB3Q05901 458 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 OVOS1Q6IE37 1185 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 DEFB132Q7Z7B7 95 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 KCNMB4Q86W47 210 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 KLHL4Q9C0H6 718 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 NT5MQ9NPB1 228 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 SPDYE5A6NIY4 337 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms