RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 STAT5AP42229 794 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 FMO5P49326 533 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 ATP2C1P98194 919 aaPredicted RBP16.81■□□□□ 0.28
PTCH1-201ENST00000331920 EFHC1Q5JVL4 640 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 ZC3H11AO75152 810 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTCH1-201ENST00000331920 IFNA16P05015 189 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 RASA2Q15283 850 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 LRIG3Q6UXM1 1119 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 ZSWIM2Q8NEG5 633 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 ADGRE3Q9BY15 652 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 SPAG6O75602 509 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 AGBL2Q5U5Z8 902 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 BDH2Q9BUT1 245 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 CHID1Q9BWS9 393 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 THOC2Q8NI27 1593 aaKnown RBP16.8■□□□□ 0.28
PTCH1-201ENST00000331920 SNX4O95219 450 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 THPOP40225 353 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 CCDC153Q494R4 210 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 EPS8L3Q8TE67 593 aaKnown RBP16.8■□□□□ 0.28
PTCH1-201ENST00000331920 ZIM3Q96PE6 472 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 BARHL2Q9NY43 387 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 F5H6K3 240 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 NOS1APO75052 506 aaPredicted RBP16.8■□□□□ 0.28
PTCH1-201ENST00000331920 STX11O75558 287 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 RBP3P10745 1247 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 PURAQ00577 322 aaKnown RBP16.8■□□□□ 0.28
PTCH1-201ENST00000331920 KLRC3Q07444 240 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 GNA13Q14344 377 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 NAIF1Q69YI7 327 aaPredicted RBP16.8■□□□□ 0.28
PTCH1-201ENST00000331920 AAASQ9NRG9 546 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 GSTK1Q9Y2Q3 226 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 AAR2Q9Y312 384 aaKnown RBP16.8■□□□□ 0.28
PTCH1-201ENST00000331920 LAMC3Q9Y6N6 1575 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 KANSL1LA0AUZ9 987 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 QRICH1Q2TAL8 776 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 COLGALT2Q8IYK4 626 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 DEFB107AQ8IZN7 70 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 PDGFCQ9NRA1 345 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTCH1-201ENST00000331920 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTCH1-201ENST00000331920 AP4E1Q9UPM8 1137 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 TMEM114B3SHH9 223 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 GLP2RO95838 553 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 HNRNPH1P31943 449 aaKnown RBP16.8■□□□□ 0.28
PTCH1-201ENST00000331920 C11orf63Q6NUN7 778 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 LRRC6Q86X45 466 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 SAE1Q9UBE0 346 aaPredicted RBP16.8■□□□□ 0.28
PTCH1-201ENST00000331920 BST2Q10589 180 aaKnown RBP16.8■□□□□ 0.28
PTCH1-201ENST00000331920 ZNF846Q147U1 533 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 JAMLQ86YT9 394 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 SYNE4Q8N205 404 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 TMEM120AQ9BXJ8 343 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 CLEC4AQ9UMR7 237 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 CFAP43Q8NDM7 1665 aa16.8■□□□□ 0.28
PTCH1-201ENST00000331920 LYNP07948 512 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 MZT2AQ6P582 158 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 MTDHQ86UE4 582 aaKnown RBP16.79■□□□□ 0.28
PTCH1-201ENST00000331920 PNMA5Q96PV4 448 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 IRX2Q9BZI1 471 aaPredicted RBP16.79■□□□□ 0.28
PTCH1-201ENST00000331920 TBC1D24Q9ULP9 559 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 AFF2P51816 1311 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 ADRM1Q16186 407 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 SLC18A3Q16572 532 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 ALG11Q2TAA5 492 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 OLFML1Q6UWY5 402 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 MFSD7Q6UXD7 560 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 PRRG4Q9BZD6 226 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 AHSPQ9NZD4 102 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 SEC22BO75396 215 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 ZC2HC1CQ53FD0 456 aaPredicted RBP16.79■□□□□ 0.28
PTCH1-201ENST00000331920 NEK5Q6P3R8 708 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 C12orf4Q9NQ89 552 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 COG5Q9UP83 839 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 GLRA3O75311 464 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 NQO1P15559 274 aaKnown RBP16.79■□□□□ 0.28
PTCH1-201ENST00000331920 IL6STP40189 918 aaPredicted RBP16.79■□□□□ 0.28
PTCH1-201ENST00000331920 SUZ12Q15022 739 aaKnown RBP16.79■□□□□ 0.28
PTCH1-201ENST00000331920 STILQ15468 1287 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 KCNV1Q6PIU1 500 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 RIBC1Q8N443 379 aaPredicted RBP16.79■□□□□ 0.28
PTCH1-201ENST00000331920 GPAMQ9HCL2 828 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 A2MP01023 1474 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 IL18RAPO95256 599 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 FAM58BPP0C7Q3 252 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 EML3Q32P44 896 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 FOXN1O15353 648 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 AP1G2O75843 785 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 FCGR1AP12314 374 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 PRDX5P30044 214 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 RPL4P36578 427 aaKnown RBP16.79■□□□□ 0.28
PTCH1-201ENST00000331920 GPR15P49685 360 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 STRIP1Q5VSL9 837 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 TMEM169Q96HH4 297 aa16.79■□□□□ 0.28
PTCH1-201ENST00000331920 CHRNGP07510 517 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 FDFT1P37268 417 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 COPZ1P61923 177 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 TAF1CQ15572 869 aaPredicted RBP16.78■□□□□ 0.28
PTCH1-201ENST00000331920 STK32CQ86UX6 486 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 TMEM132CQ8N3T6 1108 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 PRCCQ92733 491 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms