RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.43□□□□□ -1.061e-32■□□□□ 9.9
APOB-201ENST00000233242 MEI4A8MW99 385 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 FUT11Q495W5 492 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 MZT2AQ6P582 158 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 MICALL2Q8IY33 904 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 ADCY4Q8NFM4 1077 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 SLC7A14Q8TBB6 771 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 AP3S1Q92572 193 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 C3orf18Q9UK00 162 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 IQSEC2Q5JU85 1478 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 ETS1P14921 441 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 GRB10Q13322 594 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 TIGD7Q6NT04 549 aaPredicted RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 RBM44Q6ZP01 1051 aaKnown RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 WDR36Q8NI36 951 aaKnown RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 STARD8Q92502 1023 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 SGF29Q96ES7 293 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 PTTG2Q9NZH5 202 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 RAB26Q9ULW5 256 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 CDC42BPAQ5VT25 1732 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 MAPTP10636 758 aaKnown RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 MYL12AP19105 171 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 ACAP1Q15027 740 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 DUSP12Q9UNI6 340 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 SPHKAPQ2M3C7 1700 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 C2orf81A6NN90 581 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 MFSD5Q6N075 450 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 C16orf86Q6ZW13 317 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.43□□□□□ -1.069e-7■■■□□ 18.9
APOB-201ENST00000233242 KATNAL2Q8IYT4 538 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 ELMOD1Q8N336 334 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 MLPHQ9BV36 600 aaPredicted RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 CCDC154A6NI56 674 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 SQLEQ14534 574 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 POLD3Q15054 466 aaPredicted RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 CASP12Q6UXS9 341 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 TTC30AQ86WT1 665 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 BHLHE22Q8NFJ8 381 aaPredicted RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 PLEKHG4BQ96PX9 1271 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 HPS4Q9NQG7 708 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 RTN3O95197 1032 aaPredicted RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 QPRTQ15274 297 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 SCARA3Q6AZY7 606 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 LDHDQ86WU2 507 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 RPRD1BQ9NQG5 326 aaKnown RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 GALNT8Q9NY28 637 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 USP18Q9UMW8 372 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 INO80DQ53TQ3 878 aaPredicted RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 GALNT15Q8N3T1 639 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 PRMT7Q9NVM4 692 aaPredicted RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 MAPRE3Q9UPY8 281 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 LINC00854A0A1B0GVQ3 168 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 BNIP3LO60238 219 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 ADRA1DP25100 572 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 ABRAQ8N0Z2 381 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 GIPC3Q8TF64 312 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 MADDQ8WXG6 1647 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 TRMUO75648 421 aaKnown RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 ZC2HC1CQ53FD0 456 aaPredicted RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 CIAPIN1Q6FI81 312 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 ZNF605Q86T29 641 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 STK32CQ86UX6 486 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 MINDY2Q8NBR6 621 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 PIGBQ92521 554 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 TCF12Q99081 682 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 EHD3Q9NZN3 535 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 ZSCAN5CA6NGD5 496 aaPredicted RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 MYL12BO14950 172 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 DCXO43602 365 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 BAIAP3O94812 1187 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 MOCS2O96007 188 aaPredicted RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 PRKCIP41743 596 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 OTUD3Q5T2D3 398 aaPredicted RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 PLA2G4FQ68DD2 849 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 NCANO14594 1321 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 CLUHO75153 1309 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 FBXO21O94952 628 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 HNRNPH3P31942 346 aaKnown RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 TOB1P50616 345 aaPredicted RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 RPS6KA3P51812 740 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 TROAPQ12815 778 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 GALNTL6Q49A17 601 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 PABPC5Q96DU9 382 aaKnown RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 CYP3A43Q9HB55 503 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 CCDC59Q9P031 241 aaKnown RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 STON1Q9Y6Q2 735 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 ENTPD5O75356 428 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 TNFRSF21O75509 655 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 POLR2EP19388 210 aaKnown RBP8.42□□□□□ -1.06
APOB-201ENST00000233242 ACOT2P49753 483 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 DCAF6Q58WW2 860 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 SPANXN3Q5MJ09 141 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 LRRC38Q5VT99 294 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 NMRAL1Q9HBL8 299 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 ING3Q9NXR8 418 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 ARMCX1Q9P291 453 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 TCHHQ07283 1943 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 CCDC162PA2VCL2 907 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 BTN3A3O00478 584 aa8.42□□□□□ -1.06
APOB-201ENST00000233242 PPP3CCP48454 512 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms