RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 TET1Q8NFU7 2136 aa17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 VWA8A3KMH1 1905 aa17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 AIF1P55008 147 aa17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 SCAPQ12770 1279 aa17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 SPATA2LQ8IUW3 424 aaPredicted RBP17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 ANKMY2Q8IV38 441 aa17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 CCDC33Q8N5R6 958 aa17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 OLFM3Q96PB7 478 aa17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 FAM193BQ96PV7 902 aaPredicted RBP17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 ELAC1Q9H777 363 aaKnown RBP17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 LGALS13Q9UHV8 139 aa17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 FBXW11Q9UKB1 542 aa17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 ZMYND8Q9ULU4 1186 aaPredicted RBP17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 PRG3Q9Y2Y8 225 aaPredicted RBP17.85■□□□□ 0.45
RABGGTA-201ENST00000216840 I6L893 689 aaPredicted RBP17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 CHADO15335 359 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 DGKIO75912 1065 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 OAZ2O95190 189 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 CCDC38Q502W7 563 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 BSPRYQ5W0U4 402 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 C4orf50Q6ZRC1 276 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 EXOC3L1Q86VI1 746 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 MDM1Q8TC05 714 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 WDR83Q9BRX9 315 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 RAB6BQ9NRW1 208 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 DDIT4Q9NX09 232 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 EURLQ9NYK6 297 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 SCN5AQ14524 2016 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 CLUHO75153 1309 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 CREB3O43889 395 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 AMHP03971 560 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 OR4Q2P0C623 313 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 GPX6P59796 221 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 DPYSQ14117 519 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 PDIK1LQ8N165 341 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 SCAMP5Q8TAC9 235 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 CCDC110Q8TBZ0 833 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 ZCWPW1Q9H0M4 648 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 VPS37BQ9H9H4 285 aa17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.84■□□□□ 0.45
RABGGTA-201ENST00000216840 SRRM3A6NNA2 597 aaPredicted RBP17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 E7EVH7 732 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 FAM72CH0Y354 149 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 EEF2KO00418 725 aaKnown RBP17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 MFSD11O43934 449 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 CDH16O75309 829 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 GCATO75600 419 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 F9P00740 461 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 SEMA3BQ13214 749 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 TCTN1Q2MV58 587 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 SLC39A12Q504Y0 691 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 FAM72AQ5TYM5 149 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 FAM72DQ6L9T8 149 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 FOXR1Q6PIV2 292 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 RFX8Q6ZV50 586 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 FAM72BQ86X60 149 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 CYP4X1Q8N118 509 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 ZNF784Q8NCA9 323 aaPredicted RBP17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 BCAS4Q8TDM0 211 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 PYROXD1Q8WU10 500 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 ARHGEF2Q92974 986 aaKnown RBP17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 SELENOSQ9BQE4 189 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 COLEC11Q9BWP8 271 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 EPN3Q9H201 632 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 RABEP2Q9H5N1 569 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 PAK6Q9NQU5 681 aaPredicted RBP17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 PCDHB7Q9Y5E2 793 aa17.83■□□□□ 0.45
RABGGTA-201ENST00000216840 TTC3P53804 2025 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 HACD1B0YJ81 288 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 PITPNM1O00562 1244 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 TNFRSF10BO14763 440 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 TRAPPC3O43617 180 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 TADA2AO75478 443 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 MYCP01106 439 aaPredicted RBP17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 GCAP28676 217 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 ATP5DP30049 168 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 GRIK1P39086 918 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 MAGEA6P43360 314 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 CXCR3P49682 368 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 HNRNPH2P55795 449 aaKnown RBP17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 BBS9Q3SYG4 887 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 C4orf22Q6V702 233 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 CAPN12Q6ZSI9 719 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 BZW1Q7L1Q6 419 aaKnown RBP17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 TAOK1Q7L7X3 1001 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 CASD1Q96PB1 797 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 DEFB118Q96PH6 123 aa17.83■□□□□ 0.44
RABGGTA-201ENST00000216840 MYO16Q9Y6X6 1858 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 SF3B1O75533 1304 aaKnown RBP eCLIP17.82■□□□□ 0.448e-6■■■■■ 107
RABGGTA-201ENST00000216840 EXOC1LA0A1B0GW35 172 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 C5orf60A6NFR6 353 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 DCLK1O15075 740 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 VAV1P15498 845 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 GATMP50440 423 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 PAFAH1B3Q15102 231 aaKnown RBP17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 MTFR1Q15390 333 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 SYCP2LQ5T4T6 812 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 FAXCQ5TGI0 409 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 BEND5Q7L4P6 421 aa17.82■□□□□ 0.44
RABGGTA-201ENST00000216840 TAC4Q86UU9 113 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms