RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 EXOC3O60645 756 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 TACC1O75410 805 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 SERPINC1P01008 464 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 TPM2P07951 284 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 SERPINF2P08697 491 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 EPB41P11171 864 aaKnown RBP10.58□□□□□ -0.72
PHGDH-222ENST00000641587 MAOBP27338 520 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 YWHAQP27348 245 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 MTIF2P46199 727 aaKnown RBP10.58□□□□□ -0.72
PHGDH-222ENST00000641587 SLC5A3P53794 718 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 CDH8P55286 799 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 MYL6P60660 151 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 SNRPFP62306 86 aaKnown RBP10.58□□□□□ -0.72
PHGDH-222ENST00000641587 BYSLQ13895 437 aaKnown RBP10.58□□□□□ -0.72
PHGDH-222ENST00000641587 KCNJ12Q14500 433 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 WDR72Q3MJ13 1102 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 SPDYCQ5MJ68 293 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 FOXR2Q6PJQ5 311 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 TOGARAM2Q6ZUX3 1019 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 RAB44Q7Z6P3 723 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-222ENST00000641587 FAM35AQ86V20 835 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 PROSER1Q86XN7 944 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 DDX42Q86XP3 938 aaKnown RBP eCLIP10.58□□□□□ -0.72
PHGDH-222ENST00000641587 NUP93Q8N1F7 819 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 KIAA1958Q8N8K9 716 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 PNPLA1Q8N8W4 532 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 ZNF516Q92618 1163 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 ANP32BQ92688 251 aaKnown RBP10.58□□□□□ -0.72
PHGDH-222ENST00000641587 CCDC127Q96BQ5 260 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 CGRRF1Q99675 332 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 SMYD3Q9H7B4 428 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 SPHK2Q9NRA0 654 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 EHD2Q9NZN4 543 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 TBC1D14Q9P2M4 693 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 DEC1Q9P2X7 70 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 NXF1Q9UBU9 619 aaKnown RBP10.58□□□□□ -0.72
PHGDH-222ENST00000641587 BPTFQ12830 3046 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 PRRT4C9JH25 899 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 ARHGAP33O14559 1287 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 GJB3O75712 270 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 GNA14O95837 355 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 ATP1A3P13637 1013 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 TNNI1P19237 187 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 NTSR1P30989 418 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 HOXD12P35452 270 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 CASP4P49662 377 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 TNNC1P63316 161 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 SCAPQ12770 1279 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 ORC1Q13415 861 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 SURF1Q15526 300 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 SNRNP35Q16560 246 aaKnown RBP10.57□□□□□ -0.72
PHGDH-222ENST00000641587 NFIL3Q16649 462 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 HECTD3Q5T447 861 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 CDKAL1Q5VV42 579 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 BTBD8Q5XKL5 378 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 SLC36A4Q6YBV0 504 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 SCARA5Q6ZMJ2 495 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 PAQR9Q6ZVX9 377 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 C12orf56Q8IXR9 622 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 FAM186BQ8IYM0 893 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 CHPFQ8IZ52 775 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 RGL4Q8IZJ4 473 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 XXYLT1Q8NBI6 393 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 CEP76Q8TAP6 659 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 IPO4Q8TEX9 1081 aaKnown RBP10.57□□□□□ -0.72
PHGDH-222ENST00000641587 BHMTQ93088 406 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 P2RY11Q96G91 374 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 MED10Q9BTT4 135 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 SDCBP2Q9H190 292 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 XYLT2Q9H1B5 865 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 DNAJC17Q9NVM6 304 aaKnown RBP10.57□□□□□ -0.72
PHGDH-222ENST00000641587 CACNA2D2Q9NY47 1150 aa10.57□□□□□ -0.72
PHGDH-222ENST00000641587 ITPR1Q14643 2758 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 ANKRD11Q6UB99 2663 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-222ENST00000641587 PTPRBP23467 1997 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 FAM221BA6H8Z2 402 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 WASH3PC4AMC7 463 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 NEDD8-MDP1E9PL57 170 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 H0Y626 953 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 KIAA0391O15091 583 aaKnown RBP10.56□□□□□ -0.72
PHGDH-222ENST00000641587 SLC16A3O15427 465 aaKnown RBP10.56□□□□□ -0.72
PHGDH-222ENST00000641587 GREM1O60565 184 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 BEST1O76090 585 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 RTN3O95197 1032 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-222ENST00000641587 TRIM16O95361 564 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 TBX18O95935 607 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 FTH1P19P0C7X4 201 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 KRT13P13646 458 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 CCDC130P13994 396 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 PRKCSHP14314 528 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-222ENST00000641587 ZNF18P17022 549 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 EEF1GP26641 437 aaKnown RBP10.56□□□□□ -0.72
PHGDH-222ENST00000641587 PSMC2P35998 433 aaKnown RBP10.56□□□□□ -0.72
PHGDH-222ENST00000641587 DPP6P42658 865 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 FANCCQ00597 558 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 CYP24A1Q07973 514 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 PLEKHG6Q3KR16 790 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 TCP11X2Q5H9J9 407 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 TCERG1LQ5VWI1 586 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 GRAMD4Q6IC98 578 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms