RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 OXTRP30559 389 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 ADARP55265 1226 aaKnown RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 TSPY1Q01534 308 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 YWHAHQ04917 246 aaPredicted RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 CAMK2GQ13555 558 aaPredicted RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 SLC18A3Q16572 532 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 TMEM52BQ4KMG9 183 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 FAM133BQ5BKY9 247 aaKnown RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 ZNF667Q5HYK9 610 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 AP1ARQ63HQ0 302 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 C11orf96Q7Z7L8 435 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 TMTC1Q8IUR5 882 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 ARL10Q8N8L6 244 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 HLA-CQ95604 372 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 DPYSL5Q9BPU6 564 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 SYT15Q9BQS2 421 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 TUBGCP2Q9BSJ2 902 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 MCMBPQ9BTE3 642 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 OSBPL1AQ9BXW6 950 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 DRG1Q9Y295 367 aaKnown RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.8□□□□□ -1.32
RTTN-215ENST00000639487 TMEM191CA6NGB0 347 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 TMEM110-MUSTN1A8MSY1 372 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 MIF4GDA9UHW6 222 aaKnown RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 HNRNPDLO14979 420 aaKnown RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 ARHGEF15O94989 841 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 TMEM191BP0C7N4 346 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 GHRP10912 638 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 TGM2P21980 687 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 CTNNA1P35221 906 aaKnown RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 RFC1P35251 1148 aaPredicted RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 MATKP42679 507 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 GNL2Q13823 731 aaKnown RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 CCINQ13939 588 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 KIZQ2M2Z5 673 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 CBWD6Q4V339 395 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 CBWD3Q5JTY5 395 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 CBWD5Q5RIA9 395 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 TTC19Q6DKK2 380 aaPredicted RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 NRSN1Q8IZ57 195 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 PIGOQ8TEQ8 1089 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 POF1BQ8WVV4 589 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 SMARCD2Q92925 531 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 ZDHHC5Q9C0B5 715 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 TUBGCP4Q9UGJ1 667 aa6.8□□□□□ -1.32
RTTN-215ENST00000639487 SCAF8Q9UPN6 1271 aaKnown RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 ZFC3H1O60293 1989 aaKnown RBP6.8□□□□□ -1.32
RTTN-215ENST00000639487 MEIS3P2A8K0S8 358 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 MTSS1O43312 755 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 SOCS5O75159 536 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 PPFIA2O75334 1257 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 FYNP06241 537 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 NEFHP12036 1026 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 ZFXP17010 805 aaPredicted RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 DRG2P55039 364 aaKnown RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 SLC6A3Q01959 620 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 SLC25A11Q02978 314 aaKnown RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 GABPB1Q06547 395 aaPredicted RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 PARP15Q460N3 678 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 CRTC2Q53ET0 693 aaPredicted RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 KANSL1Q7Z3B3 1105 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 ZNF438Q7Z4V0 828 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 THNSL1Q8IYQ7 743 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 P2RY13Q9BPV8 354 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 RASSF4Q9H2L5 321 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 TLR8Q9NR97 1041 aaKnown RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 ILVBLA1L0T0 632 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 TEX28O15482 410 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 PQBP1O60828 265 aaKnown RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 CSDE1O75534 798 aaKnown RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 CNPP09543 421 aaKnown RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 CXCL8P10145 99 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 MZF1P28698 734 aaPredicted RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 MLH1P40692 756 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 HNRNPFP52597 415 aaKnown RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 EPHB3P54753 998 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 PRKD1Q15139 912 aaPredicted RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 ZNF423Q2M1K9 1284 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 ARHGAP15Q53QZ3 475 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 OVOS1Q6IE37 1185 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 LCA5Q86VQ0 697 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 GLIS3Q8NEA6 775 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 UHMK1Q8TAS1 419 aaKnown RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 SHKBP1Q8TBC3 707 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 ANKRD7Q92527 254 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 DHX58Q96C10 678 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 LRRC19Q9H756 370 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 KIAA1522Q9P206 1035 aaPredicted RBP6.79□□□□□ -1.32
RTTN-215ENST00000639487 AMFRQ9UKV5 643 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 PSMD3O43242 534 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 CBFA2T3O75081 653 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 MAGEA3P43357 314 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 NRLP54845 237 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 ILKQ13418 452 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 PNOCQ13519 176 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 SYCP1Q15431 976 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 SGO2Q562F6 1265 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 SPECC1LQ69YQ0 1117 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 IQCEQ6IPM2 695 aa6.79□□□□□ -1.32
RTTN-215ENST00000639487 WDR59Q6PJI9 974 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms