RNA–Protein interactions for RNA: ENST00000621790.4

TARDBP-226, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-226ENST00000621790 USP18Q9UMW8 372 aa12.14□□□□□ -0.47
TARDBP-226ENST00000621790 TRAV19A0A0A6YYK7 116 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 SOX1O00570 391 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-226ENST00000621790 CES2O00748 559 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 MDM4O15151 490 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 GLP2RO95838 553 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 MYL4P12829 197 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 TCP1P17987 556 aaKnown RBP12.13□□□□□ -0.47
TARDBP-226ENST00000621790 MIPP30301 263 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 CETN2P41208 172 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 HDAC4P56524 1084 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 RWDD2BP57060 319 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 ATP11AP98196 1134 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 SCAPQ12770 1279 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 ADGRE1Q14246 886 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 C15orf59Q2T9L4 293 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-226ENST00000621790 PRSS36Q5K4E3 855 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 ATAT1Q5SQI0 421 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 PAPD7Q5XG87 772 aaKnown RBP12.13□□□□□ -0.47
TARDBP-226ENST00000621790 NUGGCQ68CJ6 796 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 GAREM2Q75VX8 874 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 TAC4Q86UU9 113 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 DDX42Q86XP3 938 aaKnown RBP eCLIP12.13□□□□□ -0.47
TARDBP-226ENST00000621790 MAP7D3Q8IWC1 876 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 UNC45BQ8IWX7 931 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 AZIN2Q96A70 460 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 PLD4Q96BZ4 506 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 RIPOR3Q96MK2 946 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 ADAM7Q9H2U9 754 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 TASP1Q9H6P5 420 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 WDCPQ9H6R7 721 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 PRDM16Q9HAZ2 1276 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 DNAI1Q9UI46 699 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 USTQ9Y2C2 406 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 MYO7AQ13402 2215 aa12.13□□□□□ -0.47
TARDBP-226ENST00000621790 ZNF638Q14966 1978 aaKnown RBP12.12□□□□□ -0.47
TARDBP-226ENST00000621790 TRIOBPQ9H2D6 2365 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 ZNF487B1APH4 448 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 COCHO43405 550 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 TADA3O75528 432 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 LATS1O95835 1130 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 FTCDO95954 541 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 HDCP19113 662 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 KCNA4P22459 653 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 IGFBP4P22692 258 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 HTR7P34969 479 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.477e-26■■■□□ 18.2
TARDBP-226ENST00000621790 MTHFRP42898 656 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 SSR1P43307 286 aaKnown RBP12.12□□□□□ -0.47
TARDBP-226ENST00000621790 TBX4P57082 545 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 COPS2P61201 443 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 SLC7A9P82251 487 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 SLC25A11Q02978 314 aaKnown RBP12.12□□□□□ -0.47
TARDBP-226ENST00000621790 EFEMP1Q12805 493 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 NME3Q13232 169 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 PDK2Q15119 407 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 CDO1Q16878 200 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 ODF2Q5BJF6 829 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 ERMARDQ5T6L9 678 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 SYCE2Q6PIF2 218 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 SYT10Q6XYQ8 523 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 GRASPQ7Z6J2 395 aaPredicted RBP12.12□□□□□ -0.47
TARDBP-226ENST00000621790 KATNAL2Q8IYT4 538 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 RCOR2Q8IZ40 523 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 HS6ST3Q8IZP7 471 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 ARFGAP1Q8N6T3 406 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 ATP6V0D2Q8N8Y2 350 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 EXD1Q8NHP7 514 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 RNF34Q969K3 372 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 SLC39A13Q96H72 371 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 RBM41Q96IZ5 413 aaKnown RBP12.12□□□□□ -0.47
TARDBP-226ENST00000621790 PBKQ96KB5 322 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 NECTIN4Q96NY8 510 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 WDR24Q96S15 920 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 HAPLN3Q96S86 360 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 TLR10Q9BXR5 811 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 DCLK3Q9C098 648 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 CARD9Q9H257 536 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 WDR6Q9NNW5 1121 aaKnown RBP12.12□□□□□ -0.47
TARDBP-226ENST00000621790 ARHGEF38Q9NXL2 777 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 RNF14Q9UBS8 474 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 MRPS23Q9Y3D9 190 aaKnown RBP12.12□□□□□ -0.47
TARDBP-226ENST00000621790 ZFP37Q9Y6Q3 630 aaPredicted RBP12.12□□□□□ -0.47
TARDBP-226ENST00000621790 MYO9BQ13459 2157 aa12.12□□□□□ -0.47
TARDBP-226ENST00000621790 ATG2AQ2TAZ0 1938 aa12.11□□□□□ -0.47
TARDBP-226ENST00000621790 A0A1W2PRU2 124 aa12.11□□□□□ -0.47
TARDBP-226ENST00000621790 ZRANB2O95218 330 aaKnown RBP eCLIP12.11□□□□□ -0.475e-13■□□□□ 10.2
TARDBP-226ENST00000621790 IGLV3-27P01718 113 aa12.11□□□□□ -0.47
TARDBP-226ENST00000621790 APOEP02649 317 aa12.11□□□□□ -0.47
TARDBP-226ENST00000621790 TCF3P15923 654 aa12.11□□□□□ -0.47
TARDBP-226ENST00000621790 ADRA1BP35368 520 aa12.11□□□□□ -0.47
TARDBP-226ENST00000621790 HARS2P49590 506 aaKnown RBP12.11□□□□□ -0.47
TARDBP-226ENST00000621790 PGFP49763 221 aa12.11□□□□□ -0.47
TARDBP-226ENST00000621790 PEX5P50542 639 aa12.11□□□□□ -0.47
TARDBP-226ENST00000621790 EFHC2Q5JST6 749 aa12.11□□□□□ -0.47
TARDBP-226ENST00000621790 HABP4Q5JVS0 413 aaKnown RBP12.11□□□□□ -0.47
TARDBP-226ENST00000621790 RARS2Q5T160 578 aaKnown RBP12.11□□□□□ -0.47
TARDBP-226ENST00000621790 OTUD1Q5VV17 481 aaPredicted RBP12.11□□□□□ -0.47
TARDBP-226ENST00000621790 SCYL2Q6P3W7 929 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms