RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 PRR5LQ6MZQ0 368 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 ZDHHC24Q6UX98 284 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 PEG10Q86TG7 708 aaKnown RBP4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 PPP2R3CQ969Q6 453 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 SPSB4Q96A44 273 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 PBKQ96KB5 322 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 MSLNLQ96KJ4 702 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 BRIP1Q9BX63 1249 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 KRTAP4-5Q9BYR2 181 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 BTBD1Q9H0C5 482 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 SLITRK6Q9H5Y7 841 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 CXorf36Q9H7Y0 433 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 XPNPEP3Q9NQH7 507 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 FAM50BQ9Y247 325 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 TBC1D30Q9Y2I9 924 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 IBTKQ9P2D0 1353 aaPredicted RBP4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 RIC1Q4ADV7 1423 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 ATP10DQ9P241 1426 aa4.34□□□□□ -1.71
CKS1BP3-201ENST00000600888 MYH3P11055 1940 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 SCN4AP35499 1836 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 MBD3L4A6NDZ8 208 aaPredicted RBP4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 MBD3L3A6NE82 208 aaPredicted RBP4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 H0YIN7 160 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 APAF1O14727 1248 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 MGST3O14880 152 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 SLC16A3O15427 465 aaKnown RBP4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 ORC4O43929 436 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 TLR5O60602 858 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 CAND2O75155 1236 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 RASSF9O75901 435 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 HOXB7P09629 217 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 NR2F6P10588 404 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZFXP17010 805 aaPredicted RBP4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 BMP5P22003 454 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 CHRNA5P30532 468 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 CLK3P49761 638 aaKnown RBP4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 EIF2B5Q13144 721 aaKnown RBP4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 BMPR2Q13873 1038 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 WDR43Q15061 677 aaKnown RBP eCLIP4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 SAFBQ15424 915 aaKnown RBP eCLIP4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 CCAR1Q8IX12 1150 aaKnown RBP4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 SLC15A3Q8IY34 581 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 PJA1Q8NG27 643 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 BPIFB1Q8TDL5 484 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 ATRIPQ8WXE1 791 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 ATG4AQ8WYN0 398 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 STRBPQ96SI9 672 aaKnown RBP4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 THUMPD2Q9BTF0 503 aaKnown RBP4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 STK31Q9BXU1 1019 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 CHST8Q9H2A9 424 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 MIS18AQ9NYP9 233 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZNHIT2Q9UHR6 403 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 TSPYL4Q9UJ04 414 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 TLK1Q9UKI8 766 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 INSL6Q9Y581 213 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 SNX13Q9Y5W8 968 aa4.33□□□□□ -1.72
CKS1BP3-201ENST00000600888 DDX60Q8IY21 1712 aaKnown RBP4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 WDR90Q96KV7 1748 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 RNF123Q5XPI4 1314 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 MAP3K15Q6ZN16 1313 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 LOC102723971A0A1B0GUV8 181 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZAR1LA6NP61 321 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 LINC00473A8K010 186 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 RHPN2P1A8MT19 583 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 F8W8V4 182 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 PRC1O43663 620 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 ERBB2P04626 1255 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 CSF1RP07333 972 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZNF853P0CG23 659 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 SLC5A1P13866 664 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 KLRC1P26715 233 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 LIPAP38571 399 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 PIK3CBP42338 1070 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 PIP4K2AP48426 406 aaPredicted RBP4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 CACNA2D1P54289 1103 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 C1QTNF8P60827 252 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 PTCHD3Q3KNS1 767 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZNF362Q5T0B9 420 aaPredicted RBP4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZNF618Q5T7W0 954 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 TEDDM1Q5T9Z0 273 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 CCDC181Q5TID7 509 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 KSR2Q6VAB6 950 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 MAVSQ7Z434 540 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 C2CD5Q86YS7 1000 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZNF34Q8IZ26 560 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 CNBD1Q8NA66 436 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 PPP1R9BQ96SB3 815 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 DUSP26Q9BV47 211 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 UNKQ9C0B0 810 aaKnown RBP4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 RIOX1Q9H6W3 641 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 SERTAD4Q9NUC0 356 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 SLC17A6Q9P2U8 582 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 C11orf21Q9P2W6 132 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 ST3GAL5Q9UNP4 418 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 TAF1P21675 1872 aa4.32□□□□□ -1.72
CKS1BP3-201ENST00000600888 A1L4Q6 167 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 FOXN3O00409 490 aaPredicted RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 URI1O94763 535 aaPredicted RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 NXPH3O95157 252 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms