RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PLD4Q96BZ4 506 aa20.53■□□□□ 0.88
SHKBP1-214ENST00000597396 OTUB2Q96DC9 234 aa20.53■□□□□ 0.88
SHKBP1-214ENST00000597396 MSANTD3Q96H12 275 aa20.53■□□□□ 0.88
SHKBP1-214ENST00000597396 C11orf70Q9BRQ4 267 aa20.53■□□□□ 0.88
SHKBP1-214ENST00000597396 DCLK3Q9C098 648 aa20.53■□□□□ 0.88
SHKBP1-214ENST00000597396 HAUS4Q9H6D7 363 aa20.53■□□□□ 0.88
SHKBP1-214ENST00000597396 ECT2Q9H8V3 914 aa20.53■□□□□ 0.88
SHKBP1-214ENST00000597396 GOLGA8SH3BPF8 625 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 MAN2B1O00754 1011 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 MSI1O43347 362 aaKnown RBP20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 FYNP06241 537 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 SKILP12757 684 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 UNGP13051 313 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 GLULP15104 373 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 SOX9P48436 509 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 STARD6P59095 220 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 CENPCQ03188 943 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 TAF5Q15542 800 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 DCAF6Q58WW2 860 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 FAM102AQ5T9C2 384 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 SLC26A9Q7LBE3 791 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 XYLT1Q86Y38 959 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 DEFB106AQ8N104 65 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 DQX1Q8TE96 717 aaKnown RBP20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 SYN2Q92777 582 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 SERPINB11Q96P15 392 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 ZNF510Q9Y2H8 683 aa20.52■□□□□ 0.88
SHKBP1-214ENST00000597396 SPECC1L-ADORA2AF8WAN1 911 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 AP5Z1O43299 807 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 DAB1O75553 588 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 CD72P21854 359 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 MMP8P22894 467 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 CORO1AP31146 461 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 CTHP32929 405 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 SCNN1AP37088 669 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 MLLT6P55198 1093 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 RNASE9P60153 205 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 AMPD2Q01433 879 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 UBXN2BQ14CS0 331 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 TRIP4Q15650 581 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 SYPL2Q5VXT5 272 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 C1orf228Q6PIY5 440 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 ZNF852Q6ZMS4 543 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 RALGPS2Q86X27 583 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 ADAM22Q9P0K1 906 aa20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 MRPS17Q9Y2R5 130 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-214ENST00000597396 KMT2EQ8IZD2 1858 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 KANSL1LA0AUZ9 987 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 ADH1CP00326 375 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 CYP17A1P05093 508 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 CALB1P05937 261 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 HARS2P49590 506 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 TBX4P57082 545 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 CDK17Q00537 523 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 DHCR24Q15392 516 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 PPP1R2P3Q6NXS1 205 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 ZNF571Q7Z3V5 609 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 TMC6Q7Z403 805 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 TAC4Q86UU9 113 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 PHF13Q86YI8 300 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 ADGRG2Q8IZP9 1017 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 PRSS33Q8NF86 280 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 ADAM32Q8TC27 787 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 FAM3CQ92520 227 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 SLC2A13Q96QE2 648 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 SYT11Q9BT88 431 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 DDX23Q9BUQ8 820 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 FOXQ1Q9C009 403 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 BZW2Q9Y6E2 419 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 ZDBF2Q9HCK1 2354 aa20.5■□□□□ 0.87
SHKBP1-214ENST00000597396 OTOL1A6NHN0 477 aaPredicted RBP20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 GREM1O60565 184 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 TRUB2O95900 331 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 SERPING1P05155 500 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 GJA4P35212 333 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 PTPN5P54829 565 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 CWF19L1Q69YN2 538 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 ACAD10Q6JQN1 1059 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 Q6ZNB5 142 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 VPS36Q86VN1 386 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 DENND1CQ8IV53 801 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 PRRX2Q99811 253 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 FAM204AQ9H8W3 233 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 LTB4R2Q9NPC1 389 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 WDR35Q9P2L0 1181 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 NDRG2Q9UN36 371 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 ATG2BQ96BY7 2078 aa20.49■□□□□ 0.87
SHKBP1-214ENST00000597396 KIAA1549LQ6ZVL6 1849 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 TMCO5BA8MYB1 307 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 KLKB1P03952 638 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 GBP1P32455 592 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 NOS2P35228 1153 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 NNTQ13423 1086 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 TSR1Q2NL82 804 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 LY6G5CQ5SRR4 150 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 NUGGCQ68CJ6 796 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 ASTLQ6HA08 431 aaPredicted RBP20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 PHLDB2Q86SQ0 1253 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 UNC45BQ8IWX7 931 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 EXOC4Q96A65 974 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms