RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 C1orf210Q8IVY1 113 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 UNC45BQ8IWX7 931 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 EPS8L1Q8TE68 723 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 DDX1Q92499 740 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 WBP2Q969T9 261 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 NAP1L5Q96NT1 182 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 CPXM1Q96SM3 734 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 CHRDQ9H2X0 955 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 SFMBT1Q9UHJ3 866 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 LAMTOR5O43504 91 aa18.04■□□□□ 0.48
SHKBP1-212ENST00000596163 CORO1AP31146 461 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-212ENST00000596163 PPP2R5DQ14738 602 aa18.04■□□□□ 0.48
SHKBP1-212ENST00000596163 ANO4Q32M45 955 aa18.04■□□□□ 0.48
SHKBP1-212ENST00000596163 MAMSTRQ6ZN01 415 aa18.04■□□□□ 0.48
SHKBP1-212ENST00000596163 NUDT18Q6ZVK8 323 aa18.04■□□□□ 0.48
SHKBP1-212ENST00000596163 C18orf8Q96DM3 657 aa18.04■□□□□ 0.48
SHKBP1-212ENST00000596163 SERPINB11Q96P15 392 aa18.04■□□□□ 0.48
SHKBP1-212ENST00000596163 XPO6Q96QU8 1125 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-212ENST00000596163 NUP58Q9BVL2 599 aa18.04■□□□□ 0.48
SHKBP1-212ENST00000596163 EDEM3Q9BZQ6 932 aa18.04■□□□□ 0.48
SHKBP1-212ENST00000596163 HOXC11O43248 304 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 HSF2BPO75031 334 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 ATG13O75143 517 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 LATS1O95835 1130 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 CYBBP04839 570 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 MMEP08473 750 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 TBX4P57082 545 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 SLC6A3Q01959 620 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 RING1Q06587 406 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 NNTQ13423 1086 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 CCINQ13939 588 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 ANGPT1Q15389 498 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 NUGGCQ68CJ6 796 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 TMEM25Q86YD3 366 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 DENND1CQ8IV53 801 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 PRSS33Q8NF86 280 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 IQCDQ96DY2 449 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 CHFRQ96EP1 664 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 PNKPQ96T60 521 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 MARK1Q9P0L2 795 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 NOCTQ9UK39 431 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 AGO1Q9UL18 857 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 NAALADL1Q9UQQ1 740 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 TICRRQ7Z2Z1 1910 aa18.03■□□□□ 0.48
SHKBP1-212ENST00000596163 F5P12259 2224 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 KLKB1P03952 638 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 ERBB2P04626 1255 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 COL4A2P08572 1712 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 GBP1P32455 592 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 GABRB2P47870 512 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 ZNF445P59923 1031 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 CDK17Q00537 523 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 ARID5AQ03989 594 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 PTPN20Q4JDL3 420 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 FSTL4Q6MZW2 842 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 SPEM1Q8N4L4 309 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 DQX1Q8TE96 717 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 DDX50Q9BQ39 737 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 BBS2Q9BXC9 721 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 TMEM51Q9NW97 253 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 DEC1Q9P2X7 70 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 FBXO4Q9UKT5 387 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 MYO16Q9Y6X6 1858 aa18.02■□□□□ 0.48
SHKBP1-212ENST00000596163 CBFA2T2O43439 604 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 CYP1A1P04798 512 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 APODP05090 189 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 FYNP06241 537 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 SCNN1AP37088 669 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 OPRD1P41143 372 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 GRIA2P42262 883 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 SLC11A2P49281 568 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 CCR3P51677 355 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 TCF15Q12870 199 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 MTAPQ13126 283 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 DCAF6Q58WW2 860 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 FIGNQ5HY92 759 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 TPGS1Q6ZTW0 290 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 FAM183BPQ6ZVS7 135 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 SLC26A9Q7LBE3 791 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 CPXM2Q8N436 756 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 ZNF397Q8NF99 534 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 SLC20A1Q8WUM9 679 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 AZIN2Q96A70 460 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 IRX2Q9BZI1 471 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 FBRSL1Q9HCM7 1045 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 RBM12Q9NTZ6 932 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 RRN3Q9NYV6 651 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 TJP2Q9UDY2 1190 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 SLC12A6Q9UHW9 1150 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 TLR6Q9Y2C9 796 aa18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 HELZP42694 1942 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 KIF26AQ9ULI4 1882 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-212ENST00000596163 NEDD8-MDP1E9PL57 170 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 H0Y858 1186 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 MSI1O43347 362 aaKnown RBP18■□□□□ 0.47
SHKBP1-212ENST00000596163 EGFP01133 1207 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 CHRNB2P17787 502 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 CXCL12P48061 93 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 SLC6A11P48066 632 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 NOMO3P69849 1222 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms