RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 CALCOCO1Q9P1Z2 691 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 RASAL2Q9UJF2 1139 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 M0QYT0 321 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 MYO1FO00160 1098 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 IRAK2O43187 625 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 CCP110O43303 1012 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 BUB1O43683 1085 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 KRT86O43790 486 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 ENDOD1O94919 500 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 CKMP06732 381 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 PSMA2P25787 234 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 SLC7A9P82251 487 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 ATP11AP98196 1134 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 STRADAQ7RTN6 431 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 MIB1Q86YT6 1006 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 REXO1L1PQ8IX06 675 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 CENPIQ92674 756 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 PGAP3Q96FM1 320 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 CALR3Q96L12 384 aaKnown RBP16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 SERPINB11Q96P15 392 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 MYADMQ96S97 322 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 SLITRK6Q9H5Y7 841 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 FAM204AQ9H8W3 233 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 GDE1Q9NZC3 331 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 IP6K2Q9UHH9 426 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 LCMT1Q9UIC8 334 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 CDH7Q9ULB5 785 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 COL6A3P12111 3177 aa16.58■□□□□ 0.24
CSNK1D-212ENST00000580061 MACROD2A1Z1Q3 448 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 MSI1O43347 362 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 MBL2P11226 248 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 WEE1P30291 646 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 GBP1P32455 592 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 AVPR1AP37288 418 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 NNTQ13423 1086 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 PIGHQ14442 188 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 ACAP1Q15027 740 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 CDO1Q16878 200 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 SH3PXD2AQ5TCZ1 1133 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 RNF10Q8N5U6 811 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 NIPA2Q8N8Q9 360 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 ZSCAN18Q8TBC5 510 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 FAM172AQ8WUF8 416 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 ZFRQ96KR1 1074 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 KLF16Q9BXK1 252 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 LZTFL1Q9NQ48 299 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 PRDM6Q9NQX0 595 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 DDIT4Q9NX09 232 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 ARHGAP26Q9UNA1 814 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 HBS1LQ9Y450 684 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 PAXBP1Q9Y5B6 917 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 CPQQ9Y646 472 aa16.57■□□□□ 0.24
CSNK1D-212ENST00000580061 SLC12A8A0AV02 714 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 PROSCO94903 275 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 F9P00740 461 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 DESP17661 470 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 RDXP35241 583 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 KPNA1P52294 538 aaPredicted RBP16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 ATXN1P54253 815 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 NAP1L1P55209 391 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 HDAC4P56524 1084 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 COG7P83436 770 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 ZXDBP98169 803 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 DEUP1Q05D60 604 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 NME3Q13232 169 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 MESDQ14696 234 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 TRIP4Q15650 581 aaPredicted RBP16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 ARHGAP29Q52LW3 1261 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 RAB6CQ53S08 254 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 ARID3BQ8IVW6 561 aaPredicted RBP16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 CCAR2Q8N163 923 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 TPCN2Q8NHX9 752 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 SLC39A13Q96H72 371 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 ASB16Q96NS5 453 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 RAB6CQ9H0N0 254 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 SMG9Q9H0W8 520 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 GKN1Q9NS71 199 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 KCND1Q9NSA2 647 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 PIGVQ9NUD9 493 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 SMPD4Q9NXE4 827 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 TRMT1Q9NXH9 659 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 GUCA1BQ9UMX6 200 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 TLR6Q9Y2C9 796 aa16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 ZFP37Q9Y6Q3 630 aaPredicted RBP16.56■□□□□ 0.24
CSNK1D-212ENST00000580061 SYNJ2BP-COX16A0A087WUM0 186 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 USP27XA6NNY8 438 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 BUB1BO60566 1050 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 LRCH4O75427 683 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 RNF8O76064 485 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 MOCS3O95396 460 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 PRAMEF12O95522 483 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 IGLV3-27P01718 113 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 LAMP2P13473 410 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 GBP2P32456 591 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 MAN1A1P33908 653 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 TBX4P57082 545 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 TFF2Q03403 129 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 RING1Q06587 406 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 SMAD2Q15796 467 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms