RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 MYO6Q9UM54 1294 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 PRR5-ARHGAP8B1AHC4 643 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 HHLA1C9JL84 531 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 F8VZ95 297 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 RTN3O95197 1032 aaPredicted RBP16.45■□□□□ 0.22
USB1-208ENST00000563207 PFKLP17858 780 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 PBX1P40424 430 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 USP8P40818 1118 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 KLK7P49862 253 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 PDE6CP51160 858 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 ARHGAP8P85298 464 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 FBXO43Q4G163 708 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 LY6G5CQ5SRR4 150 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 HECTD3Q5T447 861 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 TCEAL6Q6IPX3 200 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 LCLAT1Q6UWP7 414 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 TMEM92Q6UXU6 159 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 CACNA2D4Q7Z3S7 1137 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 BBS7Q8IWZ6 715 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 TCEAL3Q969E4 200 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 SPAG5Q96R06 1193 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 RBSNQ9H1K0 784 aa16.45■□□□□ 0.22
USB1-208ENST00000563207 DUSP15Q9H1R2 295 aaPredicted RBP16.45■□□□□ 0.22
USB1-208ENST00000563207 CCDC163A0A0D9SF12 145 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 FAM92AA1XBS5 289 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 O00370 1275 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 MDM4O15151 490 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 CYP26A1O43174 497 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 GREM1O60565 184 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 CCDC172P0C7W6 258 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 GNA15P30679 374 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 TIE1P35590 1138 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 STAT1P42224 750 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 BCAT1P54687 386 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 JAM2P57087 298 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 PLK5Q496M5 336 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 SNX30Q5VWJ9 437 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 CLEC20AQ6ZU45 233 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 GAS2L3Q86XJ1 694 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 TMEM25Q86YD3 366 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 PHTF2Q8N3S3 785 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 CAMKK1Q8N5S9 505 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 ALLCQ8N6M5 410 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 FRMD1Q8N878 549 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 ZNF606Q8WXB4 792 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 P2RY11Q96G91 374 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 XPO4Q9C0E2 1151 aaKnown RBP16.44■□□□□ 0.22
USB1-208ENST00000563207 NMUR1Q9HB89 426 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 AJAP1Q9UKB5 411 aaPredicted RBP16.44■□□□□ 0.22
USB1-208ENST00000563207 TSPAN16Q9UKR8 245 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 HCN2Q9UL51 889 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.44■□□□□ 0.22
USB1-208ENST00000563207 ITIH6Q6UXX5 1313 aa16.44■□□□□ 0.22
USB1-208ENST00000563207 ABCA7Q8IZY2 2146 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 NCOR2Q9Y618 2525 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 SGK1O00141 431 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 LRP3O75074 770 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 APBB3O95704 486 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 SETSIPP0DME0 302 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 BCKDHBP21953 392 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 CLCN1P35523 988 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 SOX5P35711 763 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 DGKEP52429 567 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 PDZD8Q8NEN9 1154 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 OVCA2Q8WZ82 227 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 ERLEC1Q96DZ1 483 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 ZC3H10Q96K80 434 aaKnown RBP16.43■□□□□ 0.22
USB1-208ENST00000563207 PNKPQ96T60 521 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 RTKNQ9BST9 563 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 NLRC4Q9NPP4 1024 aa16.43■□□□□ 0.22
USB1-208ENST00000563207 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.43■□□□□ 0.22
USB1-208ENST00000563207 A0A1W2PQJ5 194 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 E2F8A0AVK6 867 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 SLC30A4O14863 429 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 XPO1O14980 1071 aaKnown RBP16.42■□□□□ 0.22
USB1-208ENST00000563207 EPHB6O15197 1021 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 ADAM23O75077 832 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 EPN2O95208 641 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 KAT7O95251 611 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 KLF8O95600 359 aaPredicted RBP16.42■□□□□ 0.22
USB1-208ENST00000563207 ADH5P11766 374 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 BST2Q10589 180 aaKnown RBP16.42■□□□□ 0.22
USB1-208ENST00000563207 GOLGA7BQ2TAP0 167 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 PKDCCQ504Y2 493 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 ANO7Q6IWH7 933 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 TTC30AQ86WT1 665 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 ZNF677Q86XU0 584 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 IL17RCQ8NAC3 791 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 TXNDC5Q8NBS9 432 aaKnown RBP16.42■□□□□ 0.22
USB1-208ENST00000563207 MDGA1Q8NFP4 955 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 TSTD1Q8NFU3 115 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 RLN3Q8WXF3 142 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 TFAP2BQ92481 460 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 KLF16Q9BXK1 252 aaPredicted RBP16.42■□□□□ 0.22
USB1-208ENST00000563207 NUCKS1Q9H1E3 243 aaKnown RBP16.42■□□□□ 0.22
USB1-208ENST00000563207 FBXO44Q9H4M3 255 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 EBF1Q9UH73 591 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 MMP17Q9ULZ9 603 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 PCDHGC3Q9UN70 934 aa16.42■□□□□ 0.22
USB1-208ENST00000563207 THADAQ6YHU6 1953 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms