RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 SRRM1Q8IYB3 904 aaKnown RBP5.5□□□□□ -1.53
USP8-218ENST00000561330 CLASRPQ8N2M8 674 aaKnown RBP5.5□□□□□ -1.53
USP8-218ENST00000561330 C8orf58Q8NAV2 365 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 IPO4Q8TEX9 1081 aaKnown RBP5.5□□□□□ -1.53
USP8-218ENST00000561330 OVCA2Q8WZ82 227 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 C18orf8Q96DM3 657 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 PRR11Q96HE9 360 aaPredicted RBP5.5□□□□□ -1.53
USP8-218ENST00000561330 EIF3CQ99613 913 aaKnown RBP5.5□□□□□ -1.53
USP8-218ENST00000561330 TMEM8AQ9HCN3 771 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 LRCH1Q9Y2L9 728 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 DTNAQ9Y4J8 743 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 CGB1A6NKQ9 187 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 PPP6CO00743 305 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 FYB1O15117 783 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 RNF8O76064 485 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 TUBB4AP04350 444 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 CELA2AP08217 269 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 ATF7P17544 494 aaPredicted RBP5.49□□□□□ -1.53
USP8-218ENST00000561330 MMP8P22894 467 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 GALNSP34059 522 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 AWAT1Q58HT5 328 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 CEP78Q5JTW2 689 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 CC2D1BQ5T0F9 858 aaKnown RBP5.49□□□□□ -1.53
USP8-218ENST00000561330 FAM90A2PQ658T7 463 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 MIS18BP1Q6P0N0 1132 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 SKAP1Q86WV1 359 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 C16orf71Q8IYS4 520 aaPredicted RBP5.49□□□□□ -1.53
USP8-218ENST00000561330 SAMD3Q8N6K7 520 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 KAZALD1Q96I82 304 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 HIC2Q96JB3 615 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 TTLL2Q9BWV7 592 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 ADGRE3Q9BY15 652 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 RXFP3Q9NSD7 469 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 MAFFQ9ULX9 164 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 MAGED2Q9UNF1 606 aaPredicted RBP5.49□□□□□ -1.53
USP8-218ENST00000561330 PCDHB2Q9Y5E7 798 aa5.49□□□□□ -1.53
USP8-218ENST00000561330 PNMA6EA0A0J9YXQ4 647 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 J3KTA2 159 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 PIP5K1BO14986 540 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 GLP2RO95838 553 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 EPHB2P29323 1055 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 MPGP29372 298 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 JAK3P52333 1124 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 RAE1P78406 368 aaKnown RBP5.48□□□□□ -1.53
USP8-218ENST00000561330 SRSF7Q16629 238 aaKnown RBP eCLIP5.48□□□□□ -1.53
USP8-218ENST00000561330 CCDC144NLQ6NUI1 221 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 PGBD2Q6P3X8 592 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 RANBP10Q6VN20 620 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 ZNF813Q6ZN06 617 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 GALNT16Q8N428 558 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 MPHOSPH6Q99547 160 aaKnown RBP5.48□□□□□ -1.53
USP8-218ENST00000561330 EFHD1Q9BUP0 239 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 VPS4AQ9UN37 437 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 WDR17Q8IZU2 1322 aa5.48□□□□□ -1.53
USP8-218ENST00000561330 KAT6AQ92794 2004 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 ABHD14A-ACY1A0A1B0GW23 586 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 GOLGA6L3A6NEY3 463 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 FFAR2O15552 330 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 NTSR2O95665 410 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 MBPP02686 304 aaPredicted RBP5.47□□□□□ -1.53
USP8-218ENST00000561330 IL6STP40189 918 aaPredicted RBP5.47□□□□□ -1.53
USP8-218ENST00000561330 ABCG1P45844 678 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 WDR5P61964 334 aaKnown RBP5.47□□□□□ -1.53
USP8-218ENST00000561330 CSHL1Q14406 222 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 ZNF268Q14587 947 aaPredicted RBP5.47□□□□□ -1.53
USP8-218ENST00000561330 PFKFB3Q16875 520 aaPredicted RBP5.47□□□□□ -1.53
USP8-218ENST00000561330 GGT6Q6P531 493 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 PIK3AP1Q6ZUJ8 805 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 YTHDF3Q7Z739 585 aaKnown RBP5.47□□□□□ -1.53
USP8-218ENST00000561330 ZNF527Q8NB42 609 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 PNISRQ8TF01 805 aaKnown RBP5.47□□□□□ -1.53
USP8-218ENST00000561330 VOPP1Q96AW1 172 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 SH2D3AQ9BRG2 576 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 WDR12Q9GZL7 423 aaKnown RBP5.47□□□□□ -1.53
USP8-218ENST00000561330 EPS8L2Q9H6S3 715 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 ABHD10Q9NUJ1 306 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 IGSF9Q9P2J2 1179 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 DAAM1Q9Y4D1 1078 aa5.47□□□□□ -1.53
USP8-218ENST00000561330 DHHO43323 396 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 NPPBP16860 134 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 MATN1P21941 496 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 KELP23276 732 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 DUSP1P28562 367 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 IGHMBP2P38935 993 aaKnown RBP5.46□□□□□ -1.54
USP8-218ENST00000561330 RHBDL3P58872 404 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 TNFAIP2Q03169 654 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 SLC14A1Q13336 389 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 EZH2Q15910 746 aaKnown RBP5.46□□□□□ -1.54
USP8-218ENST00000561330 SLC18B1Q6NT16 456 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 C1orf228Q6PIY5 440 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 KRT27Q7Z3Y8 459 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 OR52L2PQ8NGH6 319 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 ZNF398Q8TD17 642 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 PMM1Q92871 262 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 SLC39A13Q96H72 371 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 PRPF18Q99633 342 aaKnown RBP5.46□□□□□ -1.54
USP8-218ENST00000561330 FAM118BQ9BPY3 351 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 QTRT1Q9BXR0 403 aaKnown RBP5.46□□□□□ -1.54
USP8-218ENST00000561330 PLCB1Q9NQ66 1216 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms