RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 ZNF384Q8TF68 577 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 CLPBQ9H078 707 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 GMNCA6NCL1 334 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 BTKQ06187 659 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 C15orf59Q2T9L4 293 aaPredicted RBP17.86■□□□□ 0.45
PTPN21-208ENST00000556564 NUP93Q8N1F7 819 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 CCL16O15467 120 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 IGSF6O95976 241 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 PTPN7P35236 360 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 POM121L1PQ3SYA9 428 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 C9orf57Q5W0N0 161 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 C12orf29Q8N999 325 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 KPNA3O00505 521 aaPredicted RBP17.86■□□□□ 0.45
PTPN21-208ENST00000556564 AGTP01019 485 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 POU4F1Q01851 419 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 POU6F1Q14863 301 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 ILDR2Q71H61 639 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 REXO1L1PQ8IX06 675 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 TLE6Q9H808 572 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 CAPN10Q9HC96 672 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 AHDC1Q5TGY3 1603 aaPredicted RBP17.86■□□□□ 0.45
PTPN21-208ENST00000556564 DOK6Q6PKX4 331 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 ISCUQ9H1K1 167 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 C2CD2Q9Y426 696 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 CDH16O75309 829 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 OR1D2P34982 312 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 MAPK7Q13164 816 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 CUL3Q13618 768 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 RRP1BQ14684 758 aaKnown RBP17.85■□□□□ 0.45
PTPN21-208ENST00000556564 CCNI2Q6ZMN8 369 aaPredicted RBP17.85■□□□□ 0.45
PTPN21-208ENST00000556564 SH3RF1Q7Z6J0 888 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.85■□□□□ 0.45
PTPN21-208ENST00000556564 IGKV6D-41A0A0C4DH26 115 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 TBL1XO60907 577 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 EFCAB14O75071 495 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 ALDH1A2O94788 518 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 GLUD1P00367 558 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 MTA1Q13330 715 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 LRRC37BQ96QE4 947 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 SHCBP1LQ9BZQ2 653 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 IKZF4Q9H2S9 585 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 F8VP50 259 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 CHN1P15882 459 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 KRT4P19013 534 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 MIPP30301 263 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 TRADDQ15628 312 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 SMG5Q9UPR3 1016 aaKnown RBP17.85■□□□□ 0.45
PTPN21-208ENST00000556564 RUVBL2Q9Y230 463 aaKnown RBP17.85■□□□□ 0.45
PTPN21-208ENST00000556564 H2AFYO75367 372 aaKnown RBP17.85■□□□□ 0.45
PTPN21-208ENST00000556564 EPB42P16452 691 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 CCND3P30281 292 aaPredicted RBP17.85■□□□□ 0.45
PTPN21-208ENST00000556564 GUCY1A3Q02108 690 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 HIST2H2ACQ16777 129 aaPredicted RBP17.85■□□□□ 0.45
PTPN21-208ENST00000556564 HIST2H2AA3Q6FI13 130 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 SH2D3CQ8N5H7 860 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 NOA1Q8NC60 698 aaKnown RBP17.85■□□□□ 0.45
PTPN21-208ENST00000556564 SUSD6Q92537 303 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 TTPALQ9BTX7 342 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 NPHS2Q9NP85 383 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 PKD2L2Q9NZM6 624 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 MOXD2PA6NHM9 499 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 RBAK-RBAKDNI3L0D1 243 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 O00370 1275 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 VPS26AO75436 327 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 SLC24A5Q71RS6 500 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 GET4Q7L5D6 327 aaPredicted RBP17.85■□□□□ 0.45
PTPN21-208ENST00000556564 RASAL3Q86YV0 1011 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 GRIN3AQ8TCU5 1115 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 CASKIN2Q8WXE0 1202 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 BSNDQ8WZ55 320 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 FOXP3Q9BZS1 431 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 PCDHA2Q9Y5H9 948 aa17.85■□□□□ 0.45
PTPN21-208ENST00000556564 KLRC4O43908 158 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 GLP2RO95838 553 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 CSH1P0DML2 217 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 CSH2P0DML3 217 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 LAG3P18627 525 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 ARSHQ5FYA8 562 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 LRRC8EQ6NSJ5 796 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 NCAM2O15394 837 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 SERPINF2P08697 491 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 FGFR1P11362 822 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 MSH3P20585 1137 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 APLP1P51693 650 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 C11orf49Q9H6J7 331 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 UBA2Q9UBT2 640 aaPredicted RBP17.84■□□□□ 0.45
PTPN21-208ENST00000556564 DDX3XO00571 662 aaKnown RBP eCLIP17.84■□□□□ 0.45
PTPN21-208ENST00000556564 PRMT2P55345 433 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 MCL1Q07820 350 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 C11orf63Q6NUN7 778 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 GBP5Q96PP8 586 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 LACRTQ9GZZ8 138 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 LRRC40Q9H9A6 602 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 OR4Q2P0C623 313 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 FAM83EQ2M2I3 478 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 EIF2AQ9BY44 585 aaKnown RBP17.84■□□□□ 0.45
PTPN21-208ENST00000556564 TRIM49D1C9J1S8 452 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 SOAT2O75908 522 aa17.84■□□□□ 0.45
PTPN21-208ENST00000556564 ANGPT2O15123 496 aa17.83■□□□□ 0.45
PTPN21-208ENST00000556564 ATP5BP06576 529 aaKnown RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms