RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SYDE2Q5VT97 1194 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 ZNF449Q6P9G9 518 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 DSTYKQ6XUX3 929 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 RBM44Q6ZP01 1051 aaKnown RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 USP45Q70EL2 814 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 TFAP2DQ7Z6R9 452 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 DNAJB14Q8TBM8 379 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 RAPGEF4Q8WZA2 1011 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 TAF15Q92804 592 aaKnown RBP eCLIP1.05□□□□□ -2.24
COPB1-212ENST00000534771 CDK5RAP3Q96JB5 506 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 PIMREGQ9BSJ6 248 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 MS4A7Q9GZW8 240 aaPredicted RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 ISCUQ9H1K1 167 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 MOV10Q9HCE1 1003 aaKnown RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 TCF7L2Q9NQB0 619 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 XPNPEP3Q9NQH7 507 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 PIH1D1Q9NWS0 290 aaKnown RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 IPO11Q9UI26 975 aaKnown RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 ASAP1Q9ULH1 1129 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 MED16Q9Y2X0 877 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 INSL5Q9Y5Q6 135 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 ZNF335Q9H4Z2 1342 aaPredicted RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 COL2A1P02458 1487 aaPredicted RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 A0A087WWL8 130 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 LOC102724159A0A0B4J2E5 919 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 CLEC18AA5D8T8 446 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 DPPA5A6NC42 116 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 PRR23AA6NEV1 266 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 C16orf96A6NNT2 1141 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 BTN3A1O00481 513 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 GABRDO14764 452 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 KCNQ3O43525 872 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 RASAL1O95294 804 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 ZBTB11O95625 1053 aaPredicted RBP1.04□□□□□ -2.24
COPB1-212ENST00000534771 LDLRP01130 860 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 IFNA2P01563 188 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 PRSS2P07478 247 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 CPA1P15085 419 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 GM2AP17900 193 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 TFEBP19484 476 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 ADRA1DP25100 572 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 MCM5P33992 734 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 TXNL4AP83876 142 aaKnown RBP1.04□□□□□ -2.24
COPB1-212ENST00000534771 TIAL1Q01085 375 aaKnown RBP eCLIP1.04□□□□□ -2.24
COPB1-212ENST00000534771 GAD2Q05329 585 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 TRAF2Q12933 501 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 COASYQ13057 564 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 RBM39Q14498 530 aaKnown RBP1.04□□□□□ -2.24
COPB1-212ENST00000534771 PWP2Q15269 919 aaKnown RBP1.04□□□□□ -2.24
COPB1-212ENST00000534771 SHBQ15464 509 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 INSCQ1MX18 579 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 ZNF718Q3SXZ3 478 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 KIAA1755Q5JYT7 1200 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 ADAM5Q6NVV9 412 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 PARM1Q6UWI2 310 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 FAM83HQ6ZRV2 1179 aaPredicted RBP1.04□□□□□ -2.24
COPB1-212ENST00000534771 C16orf82Q7Z2V1 217 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 NECAB2Q7Z6G3 386 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 MUC20Q8N307 709 aaPredicted RBP1.04□□□□□ -2.24
COPB1-212ENST00000534771 MPP5Q8N3R9 675 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 PRR26Q8N8Z3 221 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 CLEC18CQ8NCF0 446 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 KAT2BQ92831 832 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 INPP5DQ92835 1189 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 MTFMTQ96DP5 389 aaKnown RBP1.04□□□□□ -2.24
COPB1-212ENST00000534771 WDYHV1Q96HA8 205 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 DUX5Q96PT3 197 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 WDR83Q9BRX9 315 aaKnown RBP1.04□□□□□ -2.24
COPB1-212ENST00000534771 HTATIP2Q9BUP3 242 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 ELOVL1Q9BW60 279 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 CINPQ9BW66 212 aaPredicted RBP1.04□□□□□ -2.24
COPB1-212ENST00000534771 C1QTNF4Q9BXJ3 329 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 EGLN1Q9GZT9 426 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 RETREG1Q9H6L5 497 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 TASP1Q9H6P5 420 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 ARMT1Q9H993 441 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 SIRT3Q9NTG7 399 aaPredicted RBP1.04□□□□□ -2.24
COPB1-212ENST00000534771 STEAP1Q9UHE8 339 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 CPA4Q9UI42 421 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 G3BP2Q9UN86 482 aaKnown RBP1.04□□□□□ -2.24
COPB1-212ENST00000534771 PCDHAC2Q9Y5I4 1007 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 PTGDR2Q9Y5Y4 395 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 CDY1Q9Y6F8 540 aa1.04□□□□□ -2.24
COPB1-212ENST00000534771 A6NNC1 897 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 BECN2A8MW95 431 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 TTC34A8MYJ7 566 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 INAFM1C9JVW0 142 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 CD3EAPO15446 510 aaKnown RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 CA12O43570 354 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 AP1G1O43747 822 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 SNX2O60749 519 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 PRAMEF2O60811 474 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 SRGAP2O75044 1071 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 CLSTN1O94985 981 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 PPP1R3DO95685 299 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 GLUD1P00367 558 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 KLKB1P03952 638 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 CYP1A2P05177 515 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 ENO1P06733 434 aaKnown RBP1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms