RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 GBP1P32455 592 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 RFC1P35251 1148 aaPredicted RBP15.61■□□□□ 0.09
NUP54-213ENST00000513352 PITX1P78337 314 aaPredicted RBP15.61■□□□□ 0.09
NUP54-213ENST00000513352 ATP11AP98196 1134 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 ZP2Q05996 745 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 MAMLD1Q13495 774 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 CDO1Q16878 200 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 C10orf76Q5T2E6 689 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 BEND5Q7L4P6 421 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 YAF2Q8IY57 180 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 ZDHHC14Q8IZN3 488 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 FGF14Q92915 247 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 KHSRPQ92945 711 aaKnown RBP eCLIP15.61■□□□□ 0.097e-7■■■□□ 17.1
NUP54-213ENST00000513352 TBCBQ99426 244 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 DESI2Q9BSY9 194 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 SMOC2Q9H3U7 446 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 LSM7Q9UK45 103 aaKnown RBP15.61■□□□□ 0.09
NUP54-213ENST00000513352 SH3BP1Q9Y3L3 701 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 NUMBLQ9Y6R0 609 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 XIRP2A4UGR9 3374 aa15.61■□□□□ 0.09
NUP54-213ENST00000513352 TCRBV5S1A1TA0A578 114 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 LOC730098B7Z3J9 87 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 M0QYT0 321 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 ARHGAP6O43182 974 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 TRUB2O95900 331 aaKnown RBP15.6■□□□□ 0.09
NUP54-213ENST00000513352 CYP1A2P05177 515 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 FCARP24071 287 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 TBX4P57082 545 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 RPL7AP62424 266 aaKnown RBP15.6■□□□□ 0.09
NUP54-213ENST00000513352 KRT83P78385 493 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 COG7P83436 770 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 USP4Q13107 963 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 HTR4Q13639 388 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 GRM2Q14416 872 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 TRNP1Q6NT89 227 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 CC2D1AQ6P1N0 951 aaPredicted RBP15.6■□□□□ 0.09
NUP54-213ENST00000513352 ZNF276Q8N554 614 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 BPIFB1Q8TDL5 484 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 RSAD2Q8WXG1 361 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 E2F7Q96AV8 911 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 ELSPBP1Q96BH3 223 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 DDX23Q9BUQ8 820 aaKnown RBP15.6■□□□□ 0.09
NUP54-213ENST00000513352 KLF16Q9BXK1 252 aaPredicted RBP15.6■□□□□ 0.09
NUP54-213ENST00000513352 RRN3Q9NYV6 651 aa15.6■□□□□ 0.09
NUP54-213ENST00000513352 HBS1LQ9Y450 684 aaKnown RBP15.6■□□□□ 0.09
NUP54-213ENST00000513352 MYO10Q9HD67 2058 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 C2CD4BA6NLJ0 364 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 LCA5LO95447 670 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 MOCS2O96007 188 aaPredicted RBP15.59■□□□□ 0.09
NUP54-213ENST00000513352 ASGR2P07307 311 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 BMP1P13497 986 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 TFE3P19532 575 aaPredicted RBP15.59■□□□□ 0.09
NUP54-213ENST00000513352 PSMA2P25787 234 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 WEE1P30291 646 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 KPNA1P52294 538 aaPredicted RBP15.59■□□□□ 0.09
NUP54-213ENST00000513352 CCZ1BP86790 482 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 CCZ1P86791 482 aaPredicted RBP15.59■□□□□ 0.09
NUP54-213ENST00000513352 DEUP1Q05D60 604 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 TRIP4Q15650 581 aaPredicted RBP15.59■□□□□ 0.09
NUP54-213ENST00000513352 C15orf59Q2T9L4 293 aaPredicted RBP15.59■□□□□ 0.09
NUP54-213ENST00000513352 SLC25A52Q3SY17 297 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 TJAP1Q5JTD0 557 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 PPP1R15BQ5SWA1 713 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 VITQ6UXI7 678 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 SND1Q7KZF4 910 aaKnown RBP eCLIP15.59■□□□□ 0.09
NUP54-213ENST00000513352 ARCQ7LC44 396 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 ZNF564Q8TBZ8 553 aaPredicted RBP15.59■□□□□ 0.09
NUP54-213ENST00000513352 PLD4Q96BZ4 506 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 RSPRY1Q96DX4 576 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 ZFRQ96KR1 1074 aaKnown RBP15.59■□□□□ 0.09
NUP54-213ENST00000513352 ZNF830Q96NB3 372 aaPredicted RBP15.59■□□□□ 0.09
NUP54-213ENST00000513352 TRPV4Q9HBA0 871 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 THG1LQ9NWX6 298 aaKnown RBP15.59■□□□□ 0.09
NUP54-213ENST00000513352 ANAPC7Q9UJX3 599 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 INTUQ9ULD6 942 aa15.59■□□□□ 0.09
NUP54-213ENST00000513352 TMEM110-MUSTN1A8MSY1 372 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 ANHXE9PGG2 379 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 IRAK2O43187 625 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 CCP110O43303 1012 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 ECI2O75521 394 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 STC2O76061 302 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 APOEP02649 317 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 CORO1AP31146 461 aaKnown RBP15.58■□□□□ 0.08
NUP54-213ENST00000513352 NOP2P46087 812 aaKnown RBP15.58■□□□□ 0.08
NUP54-213ENST00000513352 HARS2P49590 506 aaKnown RBP15.58■□□□□ 0.08
NUP54-213ENST00000513352 ZXDBP98169 803 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 ZNF77Q15935 545 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 CCDC14Q49A88 953 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 TXLNBQ8N3L3 684 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 FAM172AQ8WUF8 416 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 DEPDC1BQ8WUY9 529 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 RFFLQ8WZ73 363 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 PPP1R9BQ96SB3 815 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 NPY6RQ99463 290 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 RPP25Q9BUL9 199 aaKnown RBP15.58■□□□□ 0.08
NUP54-213ENST00000513352 PLA2G2FQ9BZM2 168 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 TRIM7Q9C029 511 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 KCNK12Q9HB15 430 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 OBP2AQ9NY56 170 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 UVRAGQ9P2Y5 699 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms