RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 BEST1O76090 585 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 STAU1O95793 577 aaKnown RBP16.47■□□□□ 0.23
HDAC6-236ENST00000498808 GJB2P29033 226 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 CDH8P55286 799 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 MYL6P60660 151 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 RRAGBQ5VZM2 374 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 FAM124AQ86V42 546 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 TMPRSS12Q86WS5 348 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 FUKQ8N0W3 1084 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 NXPE2Q96DL1 559 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 FCRL3Q96P31 734 aaPredicted RBP16.47■□□□□ 0.23
HDAC6-236ENST00000498808 CGRRF1Q99675 332 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 PCED1AQ9H1Q7 454 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 C6orf106Q9H6K1 298 aaPredicted RBP16.47■□□□□ 0.23
HDAC6-236ENST00000498808 SMYD3Q9H7B4 428 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 PANK4Q9NVE7 773 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 ANKRD6Q9Y2G4 727 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 H0Y8X5 98 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 NPC1O15118 1278 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 MDM4O15151 490 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 SYNCRIPO60506 623 aaKnown RBP16.46■□□□□ 0.23
HDAC6-236ENST00000498808 PENKP01210 267 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-236ENST00000498808 TNNI1P19237 187 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 PRKCHP24723 683 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 HOXD13P35453 343 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 ATP5C1P36542 298 aaKnown RBP16.46■□□□□ 0.23
HDAC6-236ENST00000498808 GRIA4P48058 902 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 CCT8P50990 548 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 ZNF234Q14588 700 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 KCNT1Q5JUK3 1230 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 FYB2Q5VWT5 728 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 RDH13Q8NBN7 331 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 ZNF516Q92618 1163 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 IGSF8Q969P0 613 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 GZF1Q9H116 711 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-236ENST00000498808 TM9SF3Q9HD45 589 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 TLR8Q9NR97 1041 aaKnown RBP16.46■□□□□ 0.23
HDAC6-236ENST00000498808 CCDC39Q9UFE4 941 aa16.46■□□□□ 0.23
HDAC6-236ENST00000498808 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-236ENST00000498808 COL5A1P20908 1838 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-236ENST00000498808 ACADMP11310 421 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 CCDC130P13994 396 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 ACSL1P33121 698 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 IL9RQ01113 521 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 SEMG2Q02383 582 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 GOLGA8FQ08AF8 430 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 GOLGA8DPQ0D2H9 430 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 PSMD6Q15008 389 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 SNRNP35Q16560 246 aaKnown RBP16.45■□□□□ 0.22
HDAC6-236ENST00000498808 LARP1BQ659C4 914 aaKnown RBP16.45■□□□□ 0.22
HDAC6-236ENST00000498808 PCSK4Q6UW60 755 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 LRRC69Q6ZNQ3 347 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 GPRIN1Q7Z2K8 1008 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 RBBP8NLQ8NC74 664 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-236ENST00000498808 HPS3Q969F9 1004 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 CCDC127Q96BQ5 260 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 SDCBP2Q9H190 292 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 FBXO44Q9H4M3 255 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 NMUR1Q9HB89 426 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 KIAA1586Q9HCI6 787 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 CSNK1G1Q9HCP0 422 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 OSGEPQ9NPF4 335 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 FTSJ1Q9UET6 329 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 NUDT5Q9UKK9 219 aa16.45■□□□□ 0.22
HDAC6-236ENST00000498808 TP53BP1Q12888 1972 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-236ENST00000498808 CYP26A1O43174 497 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 PAPSS1O43252 624 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-236ENST00000498808 EIF5BO60841 1220 aaKnown RBP16.44■□□□□ 0.22
HDAC6-236ENST00000498808 STC2O76061 302 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 KLKB1P03952 638 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 MAP3K7CLP57077 242 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 CYP24A1Q07973 514 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 ORC1Q13415 861 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 TEAD4Q15561 434 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 ENGASEQ8NFI3 743 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 UCMAQ8WVF2 138 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 SORCS1Q8WY21 1168 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 ELMO3Q96BJ8 720 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 PIWIL1Q96J94 861 aaKnown RBP16.44■□□□□ 0.22
HDAC6-236ENST00000498808 TNIP3Q96KP6 325 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 ELOVL2Q9NXB9 296 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 FBXO2Q9UK22 296 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-236ENST00000498808 CLEC4EQ9ULY5 219 aa16.44■□□□□ 0.22
HDAC6-236ENST00000498808 CBX4O00257 560 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 EPHX1P07099 455 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 JUPP14923 745 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 ATICP31939 592 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 CTSKP43235 329 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 PLA2G4AP47712 749 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 TRPC3Q13507 836 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 C6orf118Q5T5N4 469 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 TMEM215Q68D42 235 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 KLHDC10Q6PID8 442 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 SCARA5Q6ZMJ2 495 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 ANKS1BQ7Z6G8 1248 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 ACOT1Q86TX2 421 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 SLC2A14Q8TDB8 520 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 SYAP1Q96A49 352 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-236ENST00000498808 BIRC7Q96CA5 298 aa16.43■□□□□ 0.22
HDAC6-236ENST00000498808 CLIC6Q96NY7 704 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms