RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 STX6O43752 255 aa15□□□□□ -0.01
VARS-228ENST00000495010 C4BPAP04003 597 aaKnown RBP15□□□□□ -0.01
VARS-228ENST00000495010 RPN1P04843 607 aaKnown RBP15□□□□□ -0.01
VARS-228ENST00000495010 RALAP11233 206 aa15□□□□□ -0.01
VARS-228ENST00000495010 CHKAP35790 457 aa15□□□□□ -0.01
VARS-228ENST00000495010 ARID5AQ03989 594 aa15□□□□□ -0.01
VARS-228ENST00000495010 SUZ12Q15022 739 aaKnown RBP15□□□□□ -0.01
VARS-228ENST00000495010 GLRX5Q86SX6 157 aa15□□□□□ -0.01
VARS-228ENST00000495010 SLCO6A1Q86UG4 719 aa15□□□□□ -0.01
VARS-228ENST00000495010 TMPRSS6Q8IU80 811 aa15□□□□□ -0.01
VARS-228ENST00000495010 C12orf29Q8N999 325 aa15□□□□□ -0.01
VARS-228ENST00000495010 LINC00301Q8NCQ3 95 aa15□□□□□ -0.01
VARS-228ENST00000495010 MDM1Q8TC05 714 aa15□□□□□ -0.01
VARS-228ENST00000495010 RHBDD1Q8TEB9 315 aa15□□□□□ -0.01
VARS-228ENST00000495010 PARD3BQ8TEW8 1205 aa15□□□□□ -0.01
VARS-228ENST00000495010 TAF4BQ92750 862 aa15□□□□□ -0.01
VARS-228ENST00000495010 ZNF396Q96N95 335 aaPredicted RBP15□□□□□ -0.01
VARS-228ENST00000495010 CDC6Q99741 560 aa15□□□□□ -0.01
VARS-228ENST00000495010 NUP58Q9BVL2 599 aa15□□□□□ -0.01
VARS-228ENST00000495010 BLZF1Q9H2G9 400 aa15□□□□□ -0.01
VARS-228ENST00000495010 MAGEF1Q9HAY2 307 aa15□□□□□ -0.01
VARS-228ENST00000495010 TM7SF3Q9NS93 570 aa15□□□□□ -0.01
VARS-228ENST00000495010 OSER1Q9NX31 292 aa15□□□□□ -0.01
VARS-228ENST00000495010 KIAA1522Q9P206 1035 aaPredicted RBP15□□□□□ -0.01
VARS-228ENST00000495010 USP36Q9P275 1121 aaKnown RBP15□□□□□ -0.01
VARS-228ENST00000495010 THAP10Q9P2Z0 257 aaPredicted RBP15□□□□□ -0.01
VARS-228ENST00000495010 NAGPAQ9UK23 515 aa15□□□□□ -0.01
VARS-228ENST00000495010 SLC27A6Q9Y2P4 619 aa15□□□□□ -0.01
VARS-228ENST00000495010 MYH10P35580 1976 aa15□□□□□ -0.01
VARS-228ENST00000495010 SPEGQ15772 3267 aa15□□□□□ -0.01
VARS-228ENST00000495010 GOLGA8CPA6NN73 597 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 METTL12A8MUP2 240 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 CBFA2T3O75081 653 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 PPP6R2O75170 966 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 CILPO75339 1184 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 KIF20AO95235 890 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 VNN1O95497 513 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 CYBBP04839 570 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 ZNF883P0CG24 379 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 IL12RB1P42701 662 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 PSEN1P49768 467 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 TPMTP51580 245 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 HLA-BQ31612 363 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 Q6ZNB5 142 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 CLEC20AQ6ZU45 233 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 GPRIN1Q7Z2K8 1008 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 PLEKHO2Q8TD55 490 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 SNX19Q92543 992 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 CYFIP2Q96F07 1278 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 CDK5RAP1Q96SZ6 601 aaKnown RBP14.99□□□□□ -0.01
VARS-228ENST00000495010 HNRNPABQ99729 332 aaKnown RBP14.99□□□□□ -0.01
VARS-228ENST00000495010 DCLK3Q9C098 648 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 MKRN2Q9H000 416 aaKnown RBP14.99□□□□□ -0.01
VARS-228ENST00000495010 NMUR1Q9HB89 426 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 IL21RQ9HBE5 538 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.99□□□□□ -0.01
VARS-228ENST00000495010 EIF2B4Q9UI10 523 aaKnown RBP14.99□□□□□ -0.01
VARS-228ENST00000495010 RASAL2Q9UJF2 1139 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 FBXO10Q9UK96 956 aa14.99□□□□□ -0.01
VARS-228ENST00000495010 PVALEFA0A1B0GWK0 134 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 KCNJ18B7U540 433 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 FLRT2O43155 660 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 CUTAO60888 179 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 STC2O76061 302 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 PIK3CAP42336 1068 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 MFAP3P55082 362 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 CLDN10P78369 228 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 COG7P83436 770 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 SOWAHCQ53LP3 525 aaPredicted RBP14.98□□□□□ -0.01
VARS-228ENST00000495010 ANKS1BQ7Z6G8 1248 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 IMPG2Q9BZV3 1241 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 CIPCQ9C0C6 399 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 PNPLA8Q9NP80 782 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 HMGXB4Q9UGU5 601 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 MTMR6Q9Y217 621 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 RAXQ9Y2V3 346 aa14.98□□□□□ -0.01
VARS-228ENST00000495010 POLR2DO15514 142 aaKnown RBP14.97□□□□□ -0.01
VARS-228ENST00000495010 PENKP01210 267 aaPredicted RBP14.97□□□□□ -0.01
VARS-228ENST00000495010 EPHX1P07099 455 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 HMBSP08397 361 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 CASP1P29466 404 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 AFMP43652 599 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 EHHADHQ08426 723 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 TEAD4Q15561 434 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 GEN1Q17RS7 908 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 TMPRSS7Q7RTY8 843 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 FAM124AQ86V42 546 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 CACUL1Q86Y37 369 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 GALNT15Q8N3T1 639 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 ENGASEQ8NFI3 743 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 LRIG1Q96JA1 1093 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 NT5C1AQ9BXI3 368 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 FOXD4L1Q9NU39 408 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 ELOVL2Q9NXB9 296 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 FNDC3AQ9Y2H6 1198 aaKnown RBP14.97□□□□□ -0.01
VARS-228ENST00000495010 PCDHGB2Q9Y5G2 931 aa14.97□□□□□ -0.01
VARS-228ENST00000495010 A0A1B0GVT2 93 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 HHLA1C9JL84 531 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 CORO1AP31146 461 aaKnown RBP14.96□□□□□ -0.01
VARS-228ENST00000495010 ASPAP45381 313 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms