RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 FBXL6Q8N531 539 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 MSANTD4Q8NCY6 345 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 DQX1Q8TE96 717 aaKnown RBP14.14□□□□□ -0.15
COL1A1-208ENST00000494334 FAM3CQ92520 227 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 SYN2Q92777 582 aaPredicted RBP14.14□□□□□ -0.15
COL1A1-208ENST00000494334 OTUB2Q96DC9 234 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 CHFRQ96EP1 664 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 SLC2A13Q96QE2 648 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 ANP32EQ9BTT0 268 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 TRIM62Q9BVG3 475 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 FOXQ1Q9C009 403 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 TRIM5Q9C035 493 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 HBS1LQ9Y450 684 aaKnown RBP14.14□□□□□ -0.15
COL1A1-208ENST00000494334 COL4A3Q01955 1670 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 PI15O43692 258 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 HSF2BPO75031 334 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 CYP17A1P05093 508 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 CORO1AP31146 461 aaKnown RBP14.13□□□□□ -0.15
COL1A1-208ENST00000494334 CTHP32929 405 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 GJA4P35212 333 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 SCNN1AP37088 669 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 NSFP46459 744 aaKnown RBP14.13□□□□□ -0.15
COL1A1-208ENST00000494334 PITX1P78337 314 aaPredicted RBP14.13□□□□□ -0.15
COL1A1-208ENST00000494334 PTP4A2Q12974 167 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 NR1H3Q13133 447 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 DCAF6Q58WW2 860 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 FAM102AQ5T9C2 384 aaPredicted RBP14.13□□□□□ -0.15
COL1A1-208ENST00000494334 HGSNATQ68CP4 663 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 TXNDC11Q6PKC3 985 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 MMS22LQ6ZRQ5 1243 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 RALGPS2Q86X27 583 aaPredicted RBP14.13□□□□□ -0.15
COL1A1-208ENST00000494334 PHF13Q86YI8 300 aaPredicted RBP14.13□□□□□ -0.15
COL1A1-208ENST00000494334 ADAM32Q8TC27 787 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 PLD4Q96BZ4 506 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 MSANTD3Q96H12 275 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 SERPINB11Q96P15 392 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 C11orf70Q9BRQ4 267 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 DCLK3Q9C098 648 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 LTB4R2Q9NPC1 389 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 AGO1Q9UL18 857 aaKnown RBP14.13□□□□□ -0.15
COL1A1-208ENST00000494334 ZNF510Q9Y2H8 683 aa14.13□□□□□ -0.15
COL1A1-208ENST00000494334 MTF2Q9Y483 593 aaPredicted RBP14.13□□□□□ -0.15
COL1A1-208ENST00000494334 COL4A2P08572 1712 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 KIF26AQ9ULI4 1882 aaPredicted RBP14.12□□□□□ -0.15
COL1A1-208ENST00000494334 HELZP42694 1942 aaKnown RBP14.12□□□□□ -0.15
COL1A1-208ENST00000494334 GOLGA8SH3BPF8 625 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 DAB1O75553 588 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 TRUB2O95900 331 aaKnown RBP14.12□□□□□ -0.15
COL1A1-208ENST00000494334 IGLV3-25P01717 112 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 IGLV3-27P01718 113 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 AOC1P19801 751 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 TARSP26639 723 aaKnown RBP14.12□□□□□ -0.15
COL1A1-208ENST00000494334 NOS2P35228 1153 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 CLCN5P51795 746 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 TBX4P57082 545 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 RNASE9P60153 205 aaKnown RBP14.12□□□□□ -0.15
COL1A1-208ENST00000494334 EIF4EBP2Q13542 120 aaPredicted RBP14.12□□□□□ -0.15
COL1A1-208ENST00000494334 TRIM14Q14142 442 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 GAB4Q2WGN9 574 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 LY6G5CQ5SRR4 150 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 ASTLQ6HA08 431 aaPredicted RBP14.12□□□□□ -0.15
COL1A1-208ENST00000494334 ACAD10Q6JQN1 1059 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 C1orf228Q6PIY5 440 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 PHLDB2Q86SQ0 1253 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 TAC4Q86UU9 113 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 DENND1CQ8IV53 801 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 SUGP1Q8IWZ8 645 aaKnown RBP14.12□□□□□ -0.15
COL1A1-208ENST00000494334 ZNF687Q8N1G0 1237 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 NELL2Q99435 816 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 SPHK2Q9NRA0 654 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 TAS2R14Q9NYV8 317 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 ADAM22Q9P0K1 906 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 TMEM59LQ9UK28 342 aa14.12□□□□□ -0.15
COL1A1-208ENST00000494334 MRPS17Q9Y2R5 130 aaKnown RBP14.12□□□□□ -0.15
COL1A1-208ENST00000494334 FAM170BA6NMN3 283 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 DDX3XO00571 662 aaKnown RBP eCLIP14.11□□□□□ -0.15
COL1A1-208ENST00000494334 SERPING1P05155 500 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 AVPR2P30518 371 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 HARS2P49590 506 aaKnown RBP14.11□□□□□ -0.15
COL1A1-208ENST00000494334 VCPP55072 806 aaKnown RBP14.11□□□□□ -0.15
COL1A1-208ENST00000494334 CDK17Q00537 523 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 AMPD2Q01433 879 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 RING1Q06587 406 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 NNTQ13423 1086 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 FZD5Q13467 585 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 UBXN2BQ14CS0 331 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 PON2Q15165 354 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 NAIF1Q69YI7 327 aaPredicted RBP14.11□□□□□ -0.15
COL1A1-208ENST00000494334 MON1BQ7L1V2 547 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 TMEM25Q86YD3 366 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 TMEM105Q8N8V8 129 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 PJA1Q8NG27 643 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 SLC39A13Q96H72 371 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 FCRL2Q96LA5 508 aaPredicted RBP14.11□□□□□ -0.15
COL1A1-208ENST00000494334 OSBPL6Q9BZF3 934 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 WDR35Q9P2L0 1181 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 NDRG2Q9UN36 371 aaKnown RBP14.11□□□□□ -0.15
COL1A1-208ENST00000494334 TLR6Q9Y2C9 796 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 SIT1Q9Y3P8 196 aa14.11□□□□□ -0.15
COL1A1-208ENST00000494334 BZW2Q9Y6E2 419 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms