RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TLR6Q9Y2C9 796 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 LUC7L2Q9Y383 392 aaKnown RBP11.57□□□□□ -0.56
CPSF7-212ENST00000489728 SLC12A8A0AV02 714 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 FAM86C2PA6NEL3 165 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 PIK3R2O00459 728 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 MDM4O15151 490 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 HOXC11O43248 304 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-212ENST00000489728 IGLV3-25P01717 112 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 GYPCP04921 128 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 CALB1P05937 261 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 FYNP06241 537 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 TPM1P09493 284 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 ARSAP15289 507 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 HNRNPH3P31942 346 aaKnown RBP11.56□□□□□ -0.56
CPSF7-212ENST00000489728 CHKAP35790 457 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 RPS9P46781 194 aaKnown RBP11.56□□□□□ -0.56
CPSF7-212ENST00000489728 ARID5AQ03989 594 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 C1QBPQ07021 282 aaKnown RBP11.56□□□□□ -0.56
CPSF7-212ENST00000489728 TNK2Q07912 1038 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 KLHL30Q0D2K2 578 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 ARID5BQ14865 1188 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 PREPLQ4J6C6 727 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-212ENST00000489728 TRIM68Q6AZZ1 485 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 OR6B2Q6IFH4 312 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 XYLT1Q86Y38 959 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 VSTM4Q8IW00 320 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 UNC45BQ8IWX7 931 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 BBS7Q8IWZ6 715 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 FAM217AQ8IXS0 508 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 DRC7Q8IY82 874 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 CPXM2Q8N436 756 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 DQX1Q8TE96 717 aaKnown RBP11.56□□□□□ -0.56
CPSF7-212ENST00000489728 FAM3CQ92520 227 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 AZIN2Q96A70 460 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 VCPIP1Q96JH7 1222 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 PRRX2Q99811 253 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 KCNH6Q9H252 994 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 MARK1Q9P0L2 795 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 TJP2Q9UDY2 1190 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 STOML2Q9UJZ1 356 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 NUDT5Q9UKK9 219 aa11.56□□□□□ -0.56
CPSF7-212ENST00000489728 KMT2EQ8IZD2 1858 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 MIA3Q5JRA6 1907 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 SHISA7A6NL88 538 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.55□□□□□ -0.56
CPSF7-212ENST00000489728 TRDMT1O14717 391 aaKnown RBP11.55□□□□□ -0.56
CPSF7-212ENST00000489728 IRAK2O43187 625 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 CYP17A1P05093 508 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 SERPING1P05155 500 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 IRF1P10914 325 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 SLC2A3P11169 496 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 ADH5P11766 374 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 GZMAP12544 262 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 CORO1AP31146 461 aaKnown RBP11.55□□□□□ -0.56
CPSF7-212ENST00000489728 NOS2P35228 1153 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 MATKP42679 507 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 CDK17Q00537 523 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 GAD2Q05329 585 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 EIF4EBP2Q13542 120 aaPredicted RBP11.55□□□□□ -0.56
CPSF7-212ENST00000489728 LRRC32Q14392 662 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 DHCR24Q15392 516 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 MON1BQ7L1V2 547 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 VPS36Q86VN1 386 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 CCDC105Q8IYK2 499 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 ZNF687Q8N1G0 1237 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 SYNPOQ8N3V7 929 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 TTC16Q8NEE8 873 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 FLCNQ8NFG4 579 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 CCDC26Q8TAB7 109 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 CPA5Q8WXQ8 436 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 CLDN23Q96B33 292 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 PGAP3Q96FM1 320 aaPredicted RBP11.55□□□□□ -0.56
CPSF7-212ENST00000489728 PIWIL1Q96J94 861 aaKnown RBP11.55□□□□□ -0.56
CPSF7-212ENST00000489728 DDX50Q9BQ39 737 aaKnown RBP11.55□□□□□ -0.56
CPSF7-212ENST00000489728 LINC00597Q9H2U6 94 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 SPHK2Q9NRA0 654 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 STAP1Q9ULZ2 295 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 NAALADL1Q9UQQ1 740 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 SIT1Q9Y3P8 196 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 PAXBP1Q9Y5B6 917 aa11.55□□□□□ -0.56
CPSF7-212ENST00000489728 OTOL1A6NHN0 477 aaPredicted RBP11.54□□□□□ -0.56
CPSF7-212ENST00000489728 STK25O00506 426 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 PDGFBP01127 241 aaPredicted RBP11.54□□□□□ -0.56
CPSF7-212ENST00000489728 KLKB1P03952 638 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 TNFAIP3P21580 790 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 DRD1P21728 446 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 TARSP26639 723 aaKnown RBP11.54□□□□□ -0.56
CPSF7-212ENST00000489728 GBP1P32455 592 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 GJA4P35212 333 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 SLC11A2P49281 568 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 TBX4P57082 545 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 GRSF1Q12849 480 aaKnown RBP eCLIP11.54□□□□□ -0.56
CPSF7-212ENST00000489728 PTP4A2Q12974 167 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 UBXN2BQ14CS0 331 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 FBXO43Q4G163 708 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 DCAF6Q58WW2 860 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 TMEM196Q5HYL7 178 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 DGKKQ5KSL6 1271 aa11.54□□□□□ -0.56
CPSF7-212ENST00000489728 ACBD5Q5T8D3 534 aaPredicted RBP11.54□□□□□ -0.56
CPSF7-212ENST00000489728 IER5LQ5T953 404 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms