RNA–Protein interactions for RNA: ENST00000488741.5

CREM-238, Transcript of cAMP responsive element modulator, human

TSL 2 BASIC

Gene CREM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-238	ENST00000488741	TBL3	Q12788	808 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	STX3	Q13277	289 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	SNAPC2	Q13487	334 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	MAMLD1	Q13495	774 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	SPIDR	Q14159	915 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	KRT81	Q14533	505 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	LLGL1	Q15334	1064 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	SNRNP35	Q16560	246 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	TEX44	Q53QW1	395 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	WDR44	Q5JSH3	913 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	RARS2	Q5T160	578 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	ZFYVE27	Q5T4F4	411 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	IER5	Q5VY09	327 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	KAZN	Q674X7	775 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	PLA2G4F	Q68DD2	849 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	PGM2L1	Q6PCE3	622 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	MFSD7	Q6UXD7	560 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	TMEM179	Q6ZVK1	233 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	NIPA1	Q7RTP0	329 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	LYSMD3	Q7Z3D4	306 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	MIER3	Q7Z3K6	550 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	HAUS6	Q7Z4H7	955 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	POLN	Q7Z5Q5	900 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	ARPIN	Q7Z6K5	226 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	TTC7B	Q86TV6	843 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	ALYREF	Q86V81	257 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	SATL1	Q86VE3	508 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	SLC26A11	Q86WA9	606 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	NUDCD3	Q8IVD9	361 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	MAP4K3	Q8IVH8	894 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	MAP7D3	Q8IWC1	876 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	THNSL1	Q8IYQ7	743 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	ABRA	Q8N0Z2	381 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	NIPA2	Q8N8Q9	360 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	ADCY4	Q8NFM4	1077 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	CPT1B	Q92523	772 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	NMD3	Q96D46	503 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	LRRC39	Q96DD0	335 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	CMTM5	Q96DZ9	223 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	PRR11	Q96HE9	360 aa	Predicted RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	CLMN	Q96JQ2	1002 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	RILP	Q96NA2	401 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	UIMC1	Q96RL1	719 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	SRPK1	Q96SB4	655 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	P2RX7	Q99572	595 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	SERPINI1	Q99574	410 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	LXN	Q9BS40	222 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	ZNF577	Q9BSK1	485 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	HAUS8	Q9BT25	410 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	WDR18	Q9BV38	432 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	ZCCHC2	Q9C0B9	1178 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	RBM38	Q9H0Z9	239 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	UNC45A	Q9H3U1	944 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	SRA1	Q9HD15	236 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	GINM1	Q9NU53	330 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	THAP1	Q9NVV9	213 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	DNAJC28	Q9NX36	388 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	BTBD7	Q9P203	1132 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	PAIP2B	Q9ULR5	123 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	PRPF19	Q9UMS4	504 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	PSMD13	Q9UNM6	376 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	PLLP	Q9Y342	182 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	SH3GLB1	Q9Y371	365 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	HBS1L	Q9Y450	684 aa	Known RBP	5.32	□□□□□ -1.56
CREM-238	ENST00000488741	TELO2	Q9Y4R8	837 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	NR2E3	Q9Y5X4	410 aa		5.32	□□□□□ -1.56
CREM-238	ENST00000488741	SF3B1	O75533	1304 aa	Known RBP eCLIP	5.31	□□□□□ -1.56
CREM-238	ENST00000488741	TMEM191C	A6NGB0	347 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	PRR5-ARHGAP8	B1AHC4	643 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741		H0YCG3	227 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741		H0YJX3	145 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741		H3BNX3	289 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	GOLGA8R	I6L899	631 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	TXNDC9	O14530	226 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	VILL	O15195	856 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	WDR46	O15213	610 aa	Known RBP	5.31	□□□□□ -1.56
CREM-238	ENST00000488741	CHAD	O15335	359 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	CHMP2A	O43633	222 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	KRT38	O76015	456 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	USP1	O94782	785 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	UFL1	O94874	794 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	LSM8	O95777	96 aa	Known RBP	5.31	□□□□□ -1.56
CREM-238	ENST00000488741	TFAP2A	P05549	437 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	BPGM	P07738	259 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	KRT7	P08729	469 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	CD48	P09326	243 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	WEE2	P0C1S8	567 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	TMEM191B	P0C7N4	346 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	ZSCAN5DP	P0CG00	497 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	BMP1	P13497	986 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	CCDC130	P13994	396 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	ETS2	P15036	469 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	ATF7	P17544	494 aa	Predicted RBP	5.31	□□□□□ -1.56
CREM-238	ENST00000488741	CRHR1	P34998	444 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	GJC1	P36383	396 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	CDKN2B	P42772	138 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	CD97	P48960	835 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	RARRES1	P49788	294 aa		5.31	□□□□□ -1.56
CREM-238	ENST00000488741	AQP5	P55064	265 aa		5.31	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms