RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 DUSP9Q99956 384 aaKnown RBP16.11■□□□□ 0.17
U2AF1-211ENST00000486519 REEP2Q9BRK0 252 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 PCED1AQ9H1Q7 454 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 FBXO10Q9UK96 956 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 CDH9Q9ULB4 789 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 CLEC4EQ9ULY5 219 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 VILLO15195 856 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 SUV39H1O43463 412 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 SEMA4FO95754 770 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 CDK4P11802 303 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 ITGB6P18564 788 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 ABCB4P21439 1286 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 MFAP3P55082 362 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 HECTD3Q5T447 861 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 HTR3DQ70Z44 454 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 ZNF366Q8N895 744 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 FBXO32Q969P5 355 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 DPEP3Q9H4B8 488 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 CAAP1Q9H8G2 361 aa16.1■□□□□ 0.17
U2AF1-211ENST00000486519 DOCK9Q9BZ29 2069 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 SYNCRIPO60506 623 aaKnown RBP16.09■□□□□ 0.17
U2AF1-211ENST00000486519 KRT19P08727 400 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 CR2P20023 1033 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 YWHAQP27348 245 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 EPHA8P29322 1005 aaPredicted RBP16.09■□□□□ 0.17
U2AF1-211ENST00000486519 ST3GAL1Q11201 340 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 C4orf17Q53FE4 359 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 KRT79Q5XKE5 535 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 TMEM215Q68D42 235 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 ATG14Q6ZNE5 492 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 CACTIN-AS1Q8N1I8 211 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 LRRC52Q8N7C0 313 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 MYCBPAPQ8TBZ2 947 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 CEP295NLQ96MC4 621 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 KCNK16Q96T55 309 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 MRPL45Q9BRJ2 306 aaKnown RBP16.09■□□□□ 0.17
U2AF1-211ENST00000486519 KLF16Q9BXK1 252 aaPredicted RBP16.09■□□□□ 0.17
U2AF1-211ENST00000486519 TM6SF1Q9BZW5 370 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 LHX5Q9H2C1 402 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 STARD5Q9NSY2 213 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 LARSQ9P2J5 1176 aaKnown RBP16.09■□□□□ 0.17
U2AF1-211ENST00000486519 PAXBP1Q9Y5B6 917 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 STYXL1Q9Y6J8 313 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 NOTCH2Q04721 2471 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 LRRK2Q5S007 2527 aa16.09■□□□□ 0.17
U2AF1-211ENST00000486519 PMS2P1A4D2B8 440 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 EFSO43281 561 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 DXOO77932 396 aaKnown RBP16.08■□□□□ 0.16
U2AF1-211ENST00000486519 PLA2G4BP0C869 781 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 CDH8P55286 799 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 C21orf59P57076 290 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 ME3Q16798 604 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 SFMBT2Q5VUG0 894 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 HS2ST1Q7LGA3 356 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 MYCT1Q8N699 235 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 SAAL1Q96ER3 474 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 ACE2Q9BYF1 805 aaPredicted RBP16.08■□□□□ 0.16
U2AF1-211ENST00000486519 B3GNT5Q9BYG0 378 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 MTMR12Q9C0I1 747 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 WDR35Q9P2L0 1181 aa16.08■□□□□ 0.16
U2AF1-211ENST00000486519 USP9YO00507 2555 aaPredicted RBP16.08■□□□□ 0.16
U2AF1-211ENST00000486519 H0YCG3 227 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 MDM4O15151 490 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 EPHX1P07099 455 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 ZDHHC11BP0C7U3 371 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 CKMT2P17540 419 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 TOB1P50616 345 aaPredicted RBP16.07■□□□□ 0.16
U2AF1-211ENST00000486519 ORC2Q13416 577 aaPredicted RBP16.07■□□□□ 0.16
U2AF1-211ENST00000486519 PROX2Q3B8N5 592 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 SNX30Q5VWJ9 437 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 NUP93Q8N1F7 819 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 FAM213AQ9BRX8 229 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 EHD2Q9NZN4 543 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 ADAMTS1Q9UHI8 967 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 KCNG1Q9UIX4 513 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 SRPK3Q9UPE1 567 aa16.07■□□□□ 0.16
U2AF1-211ENST00000486519 A0A1W2PR77 199 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 DFNA5O60443 496 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 USP12O75317 370 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 IL18RAPO95256 599 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 AFPP02771 609 aaKnown RBP16.06■□□□□ 0.16
U2AF1-211ENST00000486519 WARSP23381 471 aaKnown RBP16.06■□□□□ 0.16
U2AF1-211ENST00000486519 ACP1P24666 158 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 ZNF131P52739 623 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 SKOR1P84550 965 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 GTF2BQ00403 316 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 ILKQ13418 452 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 TRIM29Q14134 588 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 HYIQ5T013 277 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 FYB2Q5VWT5 728 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 CDCP2Q5VXM1 449 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 OR2T3Q8NH03 318 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 GTF3C6Q969F1 213 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 PIWIL1Q96J94 861 aaKnown RBP16.06■□□□□ 0.16
U2AF1-211ENST00000486519 DPH1Q9BZG8 443 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 OSER1Q9NX31 292 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 SLC27A6Q9Y2P4 619 aa16.06■□□□□ 0.16
U2AF1-211ENST00000486519 TDRD6O60522 2096 aaKnown RBP16.06■□□□□ 0.16
U2AF1-211ENST00000486519 CLEC18AA5D8T8 446 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 GOLGA8IPA6NC78 632 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms