RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SEMA4AQ9H3S1 761 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 SIX2Q9NPC8 291 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 ARHGEF4Q9NR80 690 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 ST7Q9NRC1 585 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 PLK2Q9NYY3 685 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 MARCH2Q9P0N8 246 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 APEX2Q9UBZ4 518 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 SFMBT1Q9UHJ3 866 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 SLC8A2Q9UPR5 921 aa8.67□□□□□ -1.02
HDAC6-221ENST00000477561 FAM170AA1A519 330 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 HRO43593 1189 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 LILRB5O75023 590 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 TULP3O75386 442 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 KAT7O95251 611 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 APODP05090 189 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 PNMA6AP0CW24 399 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-221ENST00000477561 ATP1A3P13637 1013 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 GNA15P30679 374 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 CORO1AP31146 461 aaKnown RBP8.66□□□□□ -1.02
HDAC6-221ENST00000477561 TIE1P35590 1138 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 GPD2P43304 727 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 UBASH3AP57075 661 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 COG7P83436 770 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 KCNMA1Q12791 1236 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 STILQ15468 1287 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 FBXO43Q4G163 708 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 TCP11X2Q5H9J9 407 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 MIIPQ5JXC2 388 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 CDKAL1Q5VV42 579 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 Q6ZNB5 142 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 PRR23BQ6ZRT6 265 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 ENOSF1Q7L5Y1 443 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 LONP2Q86WA8 852 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 DENND1CQ8IV53 801 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 FMNL3Q8IVF7 1028 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 SCUBE3Q8IX30 993 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 DRC7Q8IY82 874 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 ZNF276Q8N554 614 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 USP33Q8TEY7 942 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 RNF139Q8WU17 664 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 ZNF606Q8WXB4 792 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 P2RY11Q96G91 374 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 BBS2Q9BXC9 721 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 FAM126AQ9BYI3 521 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-221ENST00000477561 VPS16Q9H269 839 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 HSD3B7Q9H2F3 369 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 CNGB3Q9NQW8 809 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 TAB2Q9NYJ8 693 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 IFNKQ9P0W0 207 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 DEC1Q9P2X7 70 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 DNAJC12Q9UKB3 198 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 STRIP2Q9ULQ0 834 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 CNTN6Q9UQ52 1028 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 PIEZO1Q92508 2521 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 WDR87Q6ZQQ6 2873 aa8.66□□□□□ -1.02
HDAC6-221ENST00000477561 ATG2BQ96BY7 2078 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 GTPBP10A4D1E9 387 aaKnown RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 TBC1D3BA6NDS4 549 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 FOXN3O00409 490 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 HOXC11O43248 304 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 AP5Z1O43299 807 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 MSI1O43347 362 aaKnown RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 MED7O43513 233 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 TSPAN3O60637 253 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 PAPSS2O95340 614 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 TYRP14679 529 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 EIF2DP41214 584 aaKnown RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 GRIA2P42262 883 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 SIM2Q14190 667 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 DMC1Q14565 340 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 HS1BP3Q53T59 392 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 GRAMD4Q6IC98 578 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 TOGARAM2Q6ZUX3 1019 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 SYT13Q7L8C5 426 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 PASD1Q8IV76 773 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 ETFBKMTQ8IXQ9 262 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 PHTF2Q8N3S3 785 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 ALLCQ8N6M5 410 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 ERLEC1Q96DZ1 483 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 HSFY1Q96LI6 401 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 LSM14BQ9BX40 385 aaKnown RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 XPO4Q9C0E2 1151 aaKnown RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 ABCC13Q9NSE7 274 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 DNAJC17Q9NVM6 304 aaKnown RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 WDR35Q9P2L0 1181 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 NCDNQ9UBB6 729 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 LIMA1Q9UHB6 759 aaKnown RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 CYTH4Q9UIA0 394 aa8.65□□□□□ -1.02
HDAC6-221ENST00000477561 AGO1Q9UL18 857 aaKnown RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 SMG5Q9UPR3 1016 aaKnown RBP8.65□□□□□ -1.02
HDAC6-221ENST00000477561 MYOFQ9NZM1 2061 aa8.65□□□□□ -1.03
HDAC6-221ENST00000477561 FRYLO94915 3013 aa8.64□□□□□ -1.03
HDAC6-221ENST00000477561 A0A1B0GTH6 734 aa8.64□□□□□ -1.03
HDAC6-221ENST00000477561 LRRC10BA6NIK2 292 aa8.64□□□□□ -1.03
HDAC6-221ENST00000477561 E5RJQ4 531 aa8.64□□□□□ -1.03
HDAC6-221ENST00000477561 SGK1O00141 431 aa8.64□□□□□ -1.03
HDAC6-221ENST00000477561 KLF8O95600 359 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-221ENST00000477561 LTFP02788 710 aa8.64□□□□□ -1.03
HDAC6-221ENST00000477561 CLCN1P35523 988 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms