RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 RIOK3O14730 519 aaKnown RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 VILLO15195 856 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 DTNBO60941 627 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 RFPL3O75679 317 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 PRPF6O94906 941 aaKnown RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 ABL1P00519 1130 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 NUDT7P0C024 238 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 CD27P26842 260 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 ACTN2P35609 894 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 ATP5C1P36542 298 aaKnown RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 CTSKP43235 329 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 PLA2G4AP47712 749 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 AP3M2P53677 418 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 SLC5A3P53794 718 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 CDH8P55286 799 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 TNNC1P63316 161 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 CFHR1Q03591 330 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 CAMK2GQ13555 558 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 MCM6Q14566 821 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 SF3A1Q15459 793 aaKnown RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 Q6ZNB5 142 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 HS2ST1Q7LGA3 356 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 ANKS1BQ7Z6G8 1248 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 SFR1Q86XK3 245 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 TMPRSS6Q8IU80 811 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 SYCP3Q8IZU3 236 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 OXR1Q8N573 874 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 DEFB119Q8N690 84 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 NAT16Q8N8M0 369 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 RASSF8Q8NHQ8 419 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 PIP4K2CQ8TBX8 421 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 FGF11Q92914 225 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 SYAP1Q96A49 352 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 FCRL3Q96P31 734 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 MMS19Q96T76 1030 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 ACOX2Q99424 681 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 KLF16Q9BXK1 252 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 MKRN2Q9H000 416 aaKnown RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 MIR1-1HGQ9H1L0 117 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 ZHX3Q9H4I2 956 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 CLMPQ9H6B4 373 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 SGK2Q9HBY8 427 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 PDE11AQ9HCR9 933 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 CGNQ9P2M7 1197 aaKnown RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 CCDC39Q9UFE4 941 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 EIF2B4Q9UI10 523 aaKnown RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 SCML2Q9UQR0 700 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 PCDHA5Q9Y5H7 936 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 MORC2Q9Y6X9 1032 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 PIEZO2Q9H5I5 2752 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 A0A1B0GTQ1 180 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 A0A1B0GVT2 93 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 A8MXQ7 604 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 EIF3DO15371 548 aaKnown RBP eCLIP7.17□□□□□ -1.26
SF3A3-205ENST00000470585 TSPAN3O60637 253 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 DXOO77932 396 aaKnown RBP7.17□□□□□ -1.26
SF3A3-205ENST00000470585 GCNT3O95395 438 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 PDGFRBP09619 1106 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 JUPP14923 745 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 MAOBP27338 520 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 WASP42768 502 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 CDR1P51861 262 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 BCAT1P54687 386 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 WNT7BP56706 349 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 RACK1P63244 317 aaKnown RBP7.17□□□□□ -1.26
SF3A3-205ENST00000470585 ASIC1P78348 528 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 COG7P83436 770 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 NUMA1Q14980 2115 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 CCDC142Q17RM4 750 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 KIF19Q2TAC6 998 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 TTC31Q49AM3 519 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-205ENST00000470585 XKR5Q6UX68 686 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 USP30Q70CQ3 517 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 TRAPPC11Q7Z392 1133 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 BRAPQ7Z569 592 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 FAM35AQ86V20 835 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 LSMEM2Q8N112 164 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 CPXM2Q8N436 756 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 ZNF557Q8N988 423 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-205ENST00000470585 SPRYD3Q8NCJ5 442 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 OR6B3Q8NGW1 331 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 OR2T3Q8NH03 318 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 WFIKKN2Q8TEU8 576 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 TSC1Q92574 1164 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 DNAJC19Q96DA6 116 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 SAAL1Q96ER3 474 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 TMEM176AQ96HP8 235 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 PIWIL1Q96J94 861 aaKnown RBP7.17□□□□□ -1.26
SF3A3-205ENST00000470585 PLIN2Q99541 437 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 B3GNT5Q9BYG0 378 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 ZNF518BQ9C0D4 1074 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 DNAI2Q9GZS0 605 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 CCSER2Q9H7U1 834 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 ERVMER34-1Q9H9K5 563 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 IL21RQ9HBE5 538 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 TM9SF3Q9HD45 589 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 TMEM30AQ9NV96 361 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 ELOVL2Q9NXB9 296 aa7.17□□□□□ -1.26
SF3A3-205ENST00000470585 CLIC5Q9NZA1 410 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms