RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 RAI2Q9Y5P3 530 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 CLIC4Q9Y696 253 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 NAV2Q8IVL1 2488 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 KCNK3O14649 394 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 TLX3O43711 291 aaPredicted RBP18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 AP1G2O75843 785 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 PENKP01210 267 aaPredicted RBP18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 TNNI1P19237 187 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 ZNF132P52740 706 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 PSMD6Q15008 389 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 KCNT1Q5JUK3 1230 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 FYB2Q5VWT5 728 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 LAYNQ6UX15 382 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 CACUL1Q86Y37 369 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 ZNF843Q8N446 348 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 RDH13Q8NBN7 331 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 NUP58Q9BVL2 599 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 C6orf106Q9H6K1 298 aaPredicted RBP18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 NMUR1Q9HB89 426 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 CSNK1G1Q9HCP0 422 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 CCDC39Q9UFE4 941 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 ATP8B3O60423 1300 aa18.13■□□□□ 0.49
UBE2D4-209ENST00000454428 E9PAM4 449 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 TGFB1I1O43294 461 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 KLKB1P03952 638 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 CCDC130P13994 396 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 PRKCHP24723 683 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 ATP5C1P36542 298 aaKnown RBP18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 EIF2S3P41091 472 aaKnown RBP18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 AFF3P51826 1226 aaKnown RBP18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 CLDN6P56747 220 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 CYP24A1Q07973 514 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 SUZ12Q15022 739 aaKnown RBP18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 PRCCQ92733 491 aaPredicted RBP18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 CCDC127Q96BQ5 260 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 PIWIL1Q96J94 861 aaKnown RBP18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 TMX3Q96JJ7 454 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 VRTNQ9H8Y1 702 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 KIAA1586Q9HCI6 787 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 TLR8Q9NR97 1041 aaKnown RBP18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 LSM7Q9UK45 103 aaKnown RBP18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 NUDT5Q9UKK9 219 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 CLEC4EQ9ULY5 219 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 ANKRD6Q9Y2G4 727 aa18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 COL5A1P20908 1838 aaPredicted RBP18.12■□□□□ 0.49
UBE2D4-209ENST00000454428 HHLA1C9JL84 531 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 CYP26A1O43174 497 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 PCDHGA12O60330 932 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 CD2BP2O95400 341 aaKnown RBP18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 C7P10643 843 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 HLA-EP13747 358 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 GRK6P43250 576 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 MAP3K7CLP57077 242 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 ZNF234Q14588 700 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 CCDC157Q569K6 752 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 TMEM215Q68D42 235 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 PCSK4Q6UW60 755 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 EPM2AIP1Q7L775 607 aaPredicted RBP18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 BRAPQ7Z569 592 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 ACOT1Q86TX2 421 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 FAM124AQ86V42 546 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 PLEKHO2Q8TD55 490 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 ORAI3Q9BRQ5 295 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 PCED1AQ9H1Q7 454 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 TM9SF3Q9HD45 589 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 AGPAT3Q9NRZ7 376 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 SCML2Q9UQR0 700 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 SRPRBQ9Y5M8 271 aaKnown RBP18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 MYO18BQ8IUG5 2567 aa18.11■□□□□ 0.49
UBE2D4-209ENST00000454428 MYLKQ15746 1914 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 H0Y8X5 98 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 NPC1O15118 1278 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 STC2O76061 302 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 ATICP31939 592 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 ACSL1P33121 698 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 ORC1Q13415 861 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 KLHDC10Q6PID8 442 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 TMPRSS12Q86WS5 348 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 SLC2A14Q8TDB8 520 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 SORCS1Q8WY21 1168 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 SNX19Q92543 992 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 IGSF8Q969P0 613 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 PANK2Q9BZ23 570 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 FBXO44Q9H4M3 255 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 OSGEPQ9NPF4 335 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 HMGXB4Q9UGU5 601 aa18.1■□□□□ 0.49
UBE2D4-209ENST00000454428 A0A1W2PQH9 124 aa18.09■□□□□ 0.49
UBE2D4-209ENST00000454428 PAPSS1O43252 624 aaPredicted RBP18.09■□□□□ 0.49
UBE2D4-209ENST00000454428 SYNCRIPO60506 623 aaKnown RBP18.09■□□□□ 0.49
UBE2D4-209ENST00000454428 GRIA4P48058 902 aa18.09■□□□□ 0.49
UBE2D4-209ENST00000454428 CASP4P49662 377 aa18.09■□□□□ 0.49
UBE2D4-209ENST00000454428 IL9RQ01113 521 aa18.09■□□□□ 0.49
UBE2D4-209ENST00000454428 GOLGA8FQ08AF8 430 aa18.09■□□□□ 0.49
UBE2D4-209ENST00000454428 GOLGA8DPQ0D2H9 430 aa18.09■□□□□ 0.49
UBE2D4-209ENST00000454428 SCARA5Q6ZMJ2 495 aa18.09■□□□□ 0.49
UBE2D4-209ENST00000454428 C12orf29Q8N999 325 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms