RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 ELP4Q96EB1 424 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 ASB2Q96Q27 587 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 OR14A2Q96R54 314 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 OSBPL9Q96SU4 736 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 MNTQ99583 582 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 CLSTN3Q9BQT9 956 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 TAOK3Q9H2K8 898 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 TTYH1Q9H313 450 aaPredicted RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 STN1Q9H668 368 aaKnown RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 ZFP64Q9NPA5 681 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 SEMA4BQ9NPR2 832 aaPredicted RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 KRT84Q9NSB2 600 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 RXFP3Q9NSD7 469 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 SLC25A10Q9UBX3 287 aaPredicted RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 RAB21Q9UL25 225 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 NFU1Q9UMS0 254 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 CAMK2AQ9UQM7 478 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 KDM3AQ9Y4C1 1321 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 SYNDIG1LA6NDD5 238 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 MUSKO15146 869 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 FOXS1O43638 330 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 ADRB2P07550 413 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 CYP3A4P08684 503 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 UBL4AP11441 157 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 DRD1P21728 446 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 MCM5P33992 734 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 THBS4P35443 961 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 KRT20P35900 424 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 RBM6P78332 1123 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 FAM189BP81408 668 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 TUBB3Q13509 450 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 EIF4A2Q14240 407 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 GEN1Q17RS7 908 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 P3H1Q32P28 736 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZNF385BQ569K4 471 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZNF569Q5MCW4 686 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 LIPMQ5VYY2 423 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 TCTN3Q6NUS6 607 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 INO80CQ6PI98 192 aaPredicted RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 ARHGEF18Q6ZSZ5 1173 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 PXKQ7Z7A4 578 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 DIS3L2Q8IYB7 885 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 PTGR2Q8N8N7 351 aaPredicted RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 FSIP1Q8NA03 581 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 OSCP1Q8WVF1 389 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 MIEF2Q96C03 454 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 NSUN4Q96CB9 384 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 TRMT61AQ96FX7 289 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 MASTLQ96GX5 879 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 REXO5Q96IC2 774 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 LENG8Q96PV6 779 aaPredicted RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 PPP1R10Q96QC0 940 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 REXO4Q9GZR2 422 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 CCDC68Q9H2F9 335 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 TRPC5Q9UL62 973 aaPredicted RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 SLC30A1Q9Y6M5 507 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 DUSP10Q9Y6W6 482 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 CCDC187A0A096LP49 1063 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 SCO2A0A1W2PP80 73 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 MARCH11A6NNE9 402 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 AGAP14A8MT82 685 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 PEX12O00623 359 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 P4HA2O15460 535 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 SPRY2O43597 315 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 RAD17O75943 681 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 CFIP05156 583 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 CLEC3BP05452 202 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 HLA-DOAP06340 250 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 LYL1P12980 280 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 LAMP2P13473 410 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 GLULP15104 373 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 PORP16435 677 aaPredicted RBP4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 ALOX12P18054 663 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 ITPKBP27987 946 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 ICAM3P32942 547 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 MLH1P40692 756 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 SCNN1GP51170 649 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 NAP1L1P55209 391 aaKnown RBP4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 RPS7P62081 194 aaKnown RBP4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 RPP30P78346 268 aaKnown RBP4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 FPGSQ05932 587 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 DEUP1Q05D60 604 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 CAMK1Q14012 370 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 SEC23BQ15437 767 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 NFIL3Q16649 462 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 UBXN11Q5T124 520 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 DENND1BQ6P3S1 775 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 MAVSQ7Z434 540 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 ANKRD23Q86SG2 305 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 D2HGDHQ8N465 521 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 OVCA2Q8WZ82 227 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 TMEM125Q96AQ2 219 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 FAM136AQ96C01 138 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 PERPQ96FX8 193 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 SLC25A18Q9H1K4 315 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZNF768Q9H5H4 540 aaKnown RBP4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 PCDHB16Q9NRJ7 776 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 SEPT11Q9NVA2 429 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms