RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 DENND2AQ9ULE3 1009 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 COL4A3BPQ9Y5P4 624 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 ARHGEF37A1IGU5 675 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 A8MX80 341 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 INO80B-WBP1J3KQ70 363 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 KLF11O14901 512 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 ATP2A1O14983 1001 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 BCL10O95999 233 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 SERPINA6P08185 405 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 MCF2P10911 925 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 NCAM1P13591 858 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 BTF3P20290 206 aaKnown RBP11.08□□□□□ -0.64
LINC00342-202ENST00000448494 PTPN9P43378 593 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 POLD2P49005 469 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 ITGA8P53708 1063 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 GALCP54803 685 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 COPZ1P61923 177 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 OCA2Q04671 838 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 TRAP1Q12931 704 aaKnown RBP11.08□□□□□ -0.64
LINC00342-202ENST00000448494 PTK6Q13882 451 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 ARHGAP44Q17R89 818 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 CLVS2Q5SYC1 327 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 KRT80Q6KB66 452 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 KSR1Q8IVT5 923 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 SEPT12Q8IYM1 358 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 ZDHHC14Q8IZN3 488 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 MARVELD3Q96A59 401 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 SHISA4Q96DD7 197 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 TRIM56Q9BRZ2 755 aaKnown RBP11.08□□□□□ -0.64
LINC00342-202ENST00000448494 IER2Q9BTL4 223 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 ACAT2Q9BWD1 397 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 MAGEE1Q9HCI5 957 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 ZNF277Q9NRM2 450 aaPredicted RBP11.08□□□□□ -0.64
LINC00342-202ENST00000448494 SMCO2A6NFE2 343 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 H3BUI4 141 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 NDUFA2O43678 99 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 EIF2AK2P19525 551 aaKnown RBP11.08□□□□□ -0.64
LINC00342-202ENST00000448494 CCNA2P20248 432 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 CSTF2P33240 577 aaKnown RBP eCLIP11.08□□□□□ -0.64
LINC00342-202ENST00000448494 BLVRAP53004 296 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 EPHB1P54762 984 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 KRT17Q04695 432 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 CDK10Q15131 360 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 CCNG2Q16589 344 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 TRAPPC3LQ5T215 181 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 UNC5AQ6ZN44 842 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 HERC6Q8IVU3 1022 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 FBXL6Q8N531 539 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 C4orf32Q8N8J7 132 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 DTX3Q8N9I9 347 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 SHKBP1Q8TBC3 707 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 S100ZQ8WXG8 99 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 KCNK16Q96T55 309 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 TM9SF2Q99805 663 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 GON7Q9BXV9 100 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 SLA2Q9H6Q3 261 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 IFT22Q9H7X7 185 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 TMEM206Q9H813 350 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 NANOGQ9H9S0 305 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 ASIC3Q9UHC3 531 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 ANAPC5Q9UJX4 755 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 HDAC9Q9UKV0 1011 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 ITGA11Q9UKX5 1188 aa11.08□□□□□ -0.64
LINC00342-202ENST00000448494 KDM3AQ9Y4C1 1321 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 FAM237BA0A1B0GVD1 139 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 TRIM64A6NGJ6 449 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 GPAA1O43292 621 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 FAM189A1O60320 539 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 ERBB2P04626 1255 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 NTRK1P04629 796 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 ITGAXP20702 1163 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 IVDP26440 423 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 WEE1P30291 646 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 MCM7P33993 719 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 IDUAP35475 653 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 MAGEA4P43358 317 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 HADHBP55084 474 aaKnown RBP11.07□□□□□ -0.64
LINC00342-202ENST00000448494 SLC25A3Q00325 362 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 TRAF2Q12933 501 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 PGS1Q32NB8 556 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 PERM1Q5SV97 790 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 ZNF600Q6ZNG1 722 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 CLYBLQ8N0X4 340 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 FIBCD1Q8N539 461 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 OMA1Q96E52 524 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 CEP170P1Q96L14 293 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 ZNF597Q96LX8 424 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 EFHD1Q9BUP0 239 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 NPLQ9BXD5 320 aaPredicted RBP11.07□□□□□ -0.64
LINC00342-202ENST00000448494 OSGEPQ9NPF4 335 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 VPS4AQ9UN37 437 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 CCDC88AQ3V6T2 1871 aa11.07□□□□□ -0.64
LINC00342-202ENST00000448494 C2orf71A6NGG8 1288 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 PRR5-ARHGAP8B1AHC4 643 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 MAN1A2O60476 641 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 EVI2BP34910 448 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 HAAOP46952 286 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 TMBIM6P55061 237 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 MARSP56192 900 aaKnown RBP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 ARHGAP8P85298 464 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms