RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 PEAR1Q5VY43 1037 aaPredicted RBP21.79■■□□□ 1.08
CPNE1-219ENST00000440240 TOGARAM2Q6ZUX3 1019 aa21.79■■□□□ 1.08
CPNE1-219ENST00000440240 RABEPKQ7Z6M1 372 aa21.79■■□□□ 1.08
CPNE1-219ENST00000440240 BHMTQ93088 406 aa21.79■■□□□ 1.08
CPNE1-219ENST00000440240 GOLPH3LQ9H4A5 285 aa21.79■■□□□ 1.08
CPNE1-219ENST00000440240 SLC6A14Q9UN76 642 aa21.79■■□□□ 1.08
CPNE1-219ENST00000440240 USP24Q9UPU5 2620 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 GIPC1O14908 333 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 ENGP17813 658 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 RAD23BP54727 409 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 ZNF33AQ06730 810 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 ANKRD52Q8NB46 1076 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 SLC4A11Q8NBS3 891 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 EEF2KMTQ96G04 330 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 CD248Q9HCU0 757 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 RMND1Q9NWS8 449 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 PLK2Q9NYY3 685 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 RASAL2Q9UJF2 1139 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 STRIP2Q9ULQ0 834 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 SLC27A6Q9Y2P4 619 aa21.78■■□□□ 1.08
CPNE1-219ENST00000440240 IGHV1OR15-9A0A0B4J2B8 117 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 NPC1O15118 1278 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 KLKB1P03952 638 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 CFIP05156 583 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 NDUFV2P19404 249 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 MAPK8P45983 427 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 ZNF132P52740 706 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 ATXN3P54252 364 aaPredicted RBP21.77■■□□□ 1.08
CPNE1-219ENST00000440240 GFPT1Q06210 699 aaPredicted RBP21.77■■□□□ 1.08
CPNE1-219ENST00000440240 ZNF252P-AS1Q0IIN9 211 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 EFEMP1Q12805 493 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 E2F5Q15329 346 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 RAB41Q5JT25 222 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 ARHGAP17Q68EM7 881 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 KIAA1211LQ6NV74 962 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 PIGZQ86VD9 579 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 SLC32A1Q9H598 525 aa21.77■■□□□ 1.08
CPNE1-219ENST00000440240 PI4KAP42356 2102 aa21.76■■□□□ 1.07
CPNE1-219ENST00000440240 PENKP01210 267 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-219ENST00000440240 CYBBP04839 570 aa21.76■■□□□ 1.07
CPNE1-219ENST00000440240 SERPINF2P08697 491 aa21.76■■□□□ 1.07
CPNE1-219ENST00000440240 RSRC2Q7L4I2 434 aaKnown RBP21.76■■□□□ 1.07
CPNE1-219ENST00000440240 DEFB119Q8N690 84 aa21.76■■□□□ 1.07
CPNE1-219ENST00000440240 TATDN2Q93075 761 aa21.76■■□□□ 1.07
CPNE1-219ENST00000440240 TSG101Q99816 390 aa21.76■■□□□ 1.07
CPNE1-219ENST00000440240 CACNA2D2Q9NY47 1150 aa21.76■■□□□ 1.07
CPNE1-219ENST00000440240 MARCH2Q9P0N8 246 aa21.76■■□□□ 1.07
CPNE1-219ENST00000440240 PLXND1Q9Y4D7 1925 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 NDUFS2O75306 463 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 HMBSP08397 361 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 CORO1AP31146 461 aaKnown RBP21.75■■□□□ 1.07
CPNE1-219ENST00000440240 YWHAGP61981 247 aaKnown RBP eCLIP21.75■■□□□ 1.07
CPNE1-219ENST00000440240 STARD3Q14849 445 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 TCERG1LQ5VWI1 586 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 FYB2Q5VWT5 728 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 PM20D1Q6GTS8 502 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 SMYD4Q8IYR2 804 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-219ENST00000440240 UCMAQ8WVF2 138 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 MRGPRX1Q96LB2 322 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 GSDMAQ96QA5 445 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 AGO1Q9UL18 857 aaKnown RBP21.75■■□□□ 1.07
CPNE1-219ENST00000440240 CYP8B1Q9UNU6 501 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 COQ4Q9Y3A0 265 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 RAD54BQ9Y620 910 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 STON1Q9Y6Q2 735 aa21.75■■□□□ 1.07
CPNE1-219ENST00000440240 ATXN2Q99700 1313 aaKnown RBP21.75■■□□□ 1.07
CPNE1-219ENST00000440240 ASCC3Q8N3C0 2202 aaKnown RBP21.75■■□□□ 1.07
CPNE1-219ENST00000440240 WASH3PC4AMC7 463 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 ZBED1O96006 694 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 PRCPP42785 496 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 TKTL1P51854 596 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 MFAP3P55082 362 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 FKBP3Q00688 224 aaKnown RBP21.74■■□□□ 1.07
CPNE1-219ENST00000440240 COBLL1Q53SF7 1204 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 SYCP2LQ5T4T6 812 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 ZNF658Q5TYW1 1059 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-219ENST00000440240 METTL3Q86U44 580 aaKnown RBP21.74■■□□□ 1.07
CPNE1-219ENST00000440240 DENND1CQ8IV53 801 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 CPXM2Q8N436 756 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 HDDC3Q8N4P3 179 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 DEFB124Q8NES8 71 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 ZNF419Q96HQ0 510 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-219ENST00000440240 ARID3AQ99856 593 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 GTPBP4Q9BZE4 634 aaKnown RBP21.74■■□□□ 1.07
CPNE1-219ENST00000440240 GDPD2Q9HCC8 539 aa21.74■■□□□ 1.07
CPNE1-219ENST00000440240 UPK3BL1B0FP48 263 aa21.73■■□□□ 1.07
CPNE1-219ENST00000440240 UPK3BL2E5RIL1 263 aa21.73■■□□□ 1.07
CPNE1-219ENST00000440240 SLC16A3O15427 465 aaKnown RBP21.73■■□□□ 1.07
CPNE1-219ENST00000440240 YWHAEP62258 255 aaKnown RBP21.73■■□□□ 1.07
CPNE1-219ENST00000440240 FOXC1Q12948 553 aa21.73■■□□□ 1.07
CPNE1-219ENST00000440240 PNOCQ13519 176 aa21.73■■□□□ 1.07
CPNE1-219ENST00000440240 SGO2Q562F6 1265 aa21.73■■□□□ 1.07
CPNE1-219ENST00000440240 DCAF17Q5H9S7 520 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-219ENST00000440240 TRIML1Q8N9V2 468 aa21.73■■□□□ 1.07
CPNE1-219ENST00000440240 FOXJ1Q92949 421 aa21.73■■□□□ 1.07
CPNE1-219ENST00000440240 SLC2A11Q9BYW1 496 aa21.73■■□□□ 1.07
CPNE1-219ENST00000440240 CAPN10Q9HC96 672 aa21.73■■□□□ 1.07
CPNE1-219ENST00000440240 OLA1Q9NTK5 396 aaKnown RBP21.73■■□□□ 1.07
CPNE1-219ENST00000440240 THAP10Q9P2Z0 257 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-219ENST00000440240 HESX1Q9UBX0 185 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms