RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 PPP1R2P41236 205 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 PSEN1P49768 467 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 RGS7P49802 495 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 BCAT1P54687 386 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 CREB5Q02930 508 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 BST2Q10589 180 aaKnown RBP10.54□□□□□ -0.72
PKP4-203ENST00000411900 PAK1Q13153 545 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 ELF2Q15723 593 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 USP39Q53GS9 565 aaKnown RBP10.54□□□□□ -0.72
PKP4-203ENST00000411900 EOGTQ5NDL2 527 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 EGFLAMQ63HQ2 1017 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 TCEAL6Q6IPX3 200 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 KLHDC10Q6PID8 442 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 Q6ZNB5 142 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 BHLHA9Q7RTU4 235 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 RASSF3Q86WH2 238 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 DENND1CQ8IV53 801 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 C12orf50Q8NA57 414 aaPredicted RBP10.54□□□□□ -0.72
PKP4-203ENST00000411900 EDEM1Q92611 657 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 TCEAL3Q969E4 200 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 ZC3H10Q96K80 434 aaKnown RBP10.54□□□□□ -0.72
PKP4-203ENST00000411900 CNOT6LQ96LI5 555 aaKnown RBP10.54□□□□□ -0.72
PKP4-203ENST00000411900 XPO6Q96QU8 1125 aaKnown RBP10.54□□□□□ -0.72
PKP4-203ENST00000411900 ACOX2Q99424 681 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 SRRTQ9BXP5 876 aaKnown RBP10.54□□□□□ -0.72
PKP4-203ENST00000411900 UBXN6Q9BZV1 441 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 LRRC4Q9HBW1 653 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 POLMQ9NP87 494 aaPredicted RBP10.54□□□□□ -0.72
PKP4-203ENST00000411900 CLIC5Q9NZA1 410 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 MARCH2Q9P0N8 246 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 SFMBT1Q9UHJ3 866 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 HCN2Q9UL51 889 aa10.54□□□□□ -0.72
PKP4-203ENST00000411900 A0A0A0MRY4 1105 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 PRRT4C9JH25 899 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 M0QYV0 167 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 CACNG3O60359 315 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 RHOBTB1O94844 696 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 HOXB2P14652 356 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 DGKGP49619 791 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 FOXK2Q01167 660 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 CETN1Q12798 172 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 KCNH2Q12809 1159 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 ARMCX6Q7L4S7 300 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 FMNL3Q8IVF7 1028 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 SIX6OS1Q8N1H7 587 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 ARHGAP18Q8N392 663 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 RBBP8NLQ8NC74 664 aaPredicted RBP10.53□□□□□ -0.72
PKP4-203ENST00000411900 LMO3Q8TAP4 145 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 NETO1Q8TDF5 533 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 LOXL4Q96JB6 756 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 CDK5RAP1Q96SZ6 601 aaKnown RBP10.53□□□□□ -0.72
PKP4-203ENST00000411900 ZSWIM1Q9BR11 485 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 WDR35Q9P2L0 1181 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 AGO1Q9UL18 857 aaKnown RBP10.53□□□□□ -0.72
PKP4-203ENST00000411900 STRIP2Q9ULQ0 834 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 RAD54BQ9Y620 910 aa10.53□□□□□ -0.72
PKP4-203ENST00000411900 TNRC6BQ9UPQ9 1833 aaKnown RBP10.53□□□□□ -0.72
PKP4-203ENST00000411900 LAMA1P25391 3075 aa10.52□□□□□ -0.72
PKP4-203ENST00000411900 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 YJEFN3A6XGL0 299 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 E7ENQ6 273 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 MSI1O43347 362 aaKnown RBP10.52□□□□□ -0.73
PKP4-203ENST00000411900 TSPAN3O60637 253 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 GABBR2O75899 941 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 AFPP02771 609 aaKnown RBP10.52□□□□□ -0.73
PKP4-203ENST00000411900 CISD3P0C7P0 127 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 ZNF806P0C7X5 589 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 KRT5P13647 590 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 SDHBP21912 280 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 DHPSP49366 369 aaPredicted RBP10.52□□□□□ -0.73
PKP4-203ENST00000411900 COG7P83436 770 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 HSF5Q4G112 596 aaPredicted RBP10.52□□□□□ -0.73
PKP4-203ENST00000411900 PREPLQ4J6C6 727 aaPredicted RBP10.52□□□□□ -0.73
PKP4-203ENST00000411900 FYB2Q5VWT5 728 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 BSPRYQ5W0U4 402 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 PMS2CLQ68D20 193 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 PM20D1Q6GTS8 502 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 PMF1Q6P1K2 205 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 LCLAT1Q6UWP7 414 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 NUDT18Q6ZVK8 323 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 TRIM59Q8IWR1 403 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 TMEFF1Q8IYR6 380 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 CHPFQ8IZ52 775 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 DEFB119Q8N690 84 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 EHBP1Q8NDI1 1231 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 CLEC4CQ8WTT0 213 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 RNF139Q8WU17 664 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 KREMEN1Q96MU8 473 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 RTKNQ9BST9 563 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 CRACR2AQ9BSW2 395 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 MIS12Q9H081 205 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 INTS2Q9H0H0 1204 aaKnown RBP10.52□□□□□ -0.73
PKP4-203ENST00000411900 SLC6A17Q9H1V8 727 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 FAM124BQ9H5Z6 455 aaPredicted RBP10.52□□□□□ -0.73
PKP4-203ENST00000411900 CACNA2D2Q9NY47 1150 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 MARK1Q9P0L2 795 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 CLEC4EQ9ULY5 219 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.52□□□□□ -0.731e-6■■■□□ 18.3
PKP4-203ENST00000411900 PLXND1Q9Y4D7 1925 aa10.52□□□□□ -0.73
PKP4-203ENST00000411900 ADAMTS9Q9P2N4 1935 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms