RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.21□□□□□ -0.3
HERC3-203ENST00000407637 PIWIL2Q8TC59 973 aaKnown RBP13.21□□□□□ -0.3
HERC3-203ENST00000407637 SLITRK1Q96PX8 696 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 FERMT1Q9BQL6 677 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 CCDC68Q9H2F9 335 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 JMJD4Q9H9V9 463 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 PNPLA3Q9NST1 481 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 TFCP2L1Q9NZI6 479 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.21□□□□□ -0.3
HERC3-203ENST00000407637 PPP1R1BQ9UD71 204 aaPredicted RBP13.21□□□□□ -0.3
HERC3-203ENST00000407637 AFG3L2Q9Y4W6 797 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 DOT1LQ8TEK3 1739 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 ZBTB39O15060 712 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 DCXO43602 365 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 FAM189A1O60320 539 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 CD1EP15812 388 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 FGFR3P22607 806 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 TCF7P36402 384 aaPredicted RBP13.2□□□□□ -0.3
HERC3-203ENST00000407637 ELK3P41970 407 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 MFAP3P55082 362 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 EIF6P56537 245 aaKnown RBP13.2□□□□□ -0.3
HERC3-203ENST00000407637 OTUD4Q01804 1114 aaKnown RBP13.2□□□□□ -0.3
HERC3-203ENST00000407637 TTC39BQ5VTQ0 682 aaPredicted RBP13.2□□□□□ -0.3
HERC3-203ENST00000407637 MYO1HQ8N1T3 1032 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 RNF148Q8N7C7 305 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 PPM1NQ8N819 430 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 TMEM102Q8N9M5 508 aaPredicted RBP13.2□□□□□ -0.3
HERC3-203ENST00000407637 NEDD1Q8NHV4 660 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 PTCD2Q8WV60 388 aaKnown RBP13.2□□□□□ -0.3
HERC3-203ENST00000407637 SEMA4DQ92854 862 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 SEMA6AQ9H2E6 1030 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 THAP1Q9NVV9 213 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 XPO7Q9UIA9 1087 aaKnown RBP13.2□□□□□ -0.3
HERC3-203ENST00000407637 POU2F3Q9UKI9 436 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 ATF5Q9Y2D1 282 aaPredicted RBP13.2□□□□□ -0.3
HERC3-203ENST00000407637 PNMA6FA0A0J9YX94 578 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 PRSS51A0A1B0GVH4 220 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 ANKRD34BA5PLL1 514 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 NOP56O00567 594 aaKnown RBP13.2□□□□□ -0.3
HERC3-203ENST00000407637 ZC3H11AO75152 810 aaKnown RBP eCLIP13.2□□□□□ -0.3
HERC3-203ENST00000407637 ENTPD3O75355 529 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 C8BP07358 591 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 KRT5P13647 590 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 P4HA1P13674 534 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 NT5C2P49902 561 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 NUDT2P50583 147 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 EIF3EP60228 445 aaKnown RBP13.2□□□□□ -0.3
HERC3-203ENST00000407637 GPR107Q5VW38 600 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 IL23RQ5VWK5 629 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 CLEC10AQ8IUN9 316 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 ADGRF4Q8IZF3 695 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 PDIK1LQ8N165 341 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 KLHL32Q96NJ5 620 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 CTRCQ99895 268 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 KLHL25Q9H0H3 589 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 CDH19Q9H159 772 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 CLK4Q9HAZ1 481 aaKnown RBP13.2□□□□□ -0.3
HERC3-203ENST00000407637 RAB20Q9NX57 234 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 SAE1Q9UBE0 346 aaPredicted RBP13.2□□□□□ -0.3
HERC3-203ENST00000407637 KLHL3Q9UH77 587 aa13.2□□□□□ -0.3
HERC3-203ENST00000407637 PSME4Q14997 1843 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 S100BP04271 92 aaPredicted RBP13.19□□□□□ -0.3
HERC3-203ENST00000407637 IDH3AP50213 366 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 PKNOX1P55347 436 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 SLC15A2Q16348 729 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 MOGQ16653 247 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 ABCB5Q2M3G0 1257 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 MGAT5BQ3V5L5 792 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 TMEM26Q6ZUK4 368 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 PCGF5Q86SE9 256 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 CADM3Q8N126 398 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 CCDC138Q96M89 665 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 NAA50Q9GZZ1 169 aaKnown RBP13.19□□□□□ -0.3
HERC3-203ENST00000407637 COQ10BQ9H8M1 238 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 PALMDQ9NP74 551 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 DAPK2Q9UIK4 370 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 DRG1Q9Y295 367 aaKnown RBP13.19□□□□□ -0.3
HERC3-203ENST00000407637 PHLPP1O60346 1717 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 A6NL46 340 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 ZNF701M0R085 212 aaPredicted RBP13.19□□□□□ -0.3
HERC3-203ENST00000407637 AIM2O14862 343 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 RNASEH2AO75792 299 aaKnown RBP13.19□□□□□ -0.3
HERC3-203ENST00000407637 ITGAVP06756 1048 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 UNGP13051 313 aaPredicted RBP13.19□□□□□ -0.3
HERC3-203ENST00000407637 MZF1P28698 734 aaPredicted RBP13.19□□□□□ -0.3
HERC3-203ENST00000407637 SLC16A2P36021 539 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 MS4A2Q01362 244 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 ODR4Q5SWX8 454 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 TTBK2Q6IQ55 1244 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 ANKRD26P1Q6NSI1 321 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 EEPD1Q7L9B9 569 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 HM13Q8TCT9 377 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 EFHD2Q96C19 240 aaPredicted RBP13.19□□□□□ -0.3
HERC3-203ENST00000407637 DCPSQ96C86 337 aaKnown RBP13.19□□□□□ -0.3
HERC3-203ENST00000407637 CFAP36Q96G28 342 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 C11orf70Q9BRQ4 267 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 UNKQ9C0B0 810 aaKnown RBP13.19□□□□□ -0.3
HERC3-203ENST00000407637 PARVBQ9HBI1 364 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 PNPOQ9NVS9 261 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms