RNA–Protein interactions for RNA: ENST00000401959.5

SNU13-203, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNU13, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-203ENST00000401959 TMEM209Q96SK2 561 aa13.58□□□□□ -0.24
SNU13-203ENST00000401959 RHOBTB2Q9BYZ6 727 aa13.58□□□□□ -0.24
SNU13-203ENST00000401959 CENPHQ9H3R5 247 aa13.58□□□□□ -0.24
SNU13-203ENST00000401959 MTMR10Q9NXD2 777 aa13.58□□□□□ -0.24
SNU13-203ENST00000401959 NAALADL1Q9UQQ1 740 aa13.58□□□□□ -0.24
SNU13-203ENST00000401959 COL4A4P53420 1690 aaPredicted RBP13.58□□□□□ -0.24
SNU13-203ENST00000401959 TTC3P53804 2025 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 SCN5AQ14524 2016 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 BCLAF3A2AJT9 711 aaKnown RBP13.57□□□□□ -0.24
SNU13-203ENST00000401959 VGLL3A8MV65 326 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 H3BRJ5 948 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 TTC4O95801 387 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 F9P00740 461 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 SHBGP04278 402 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 FYNP06241 537 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 RPL22P35268 128 aaKnown RBP13.57□□□□□ -0.24
SNU13-203ENST00000401959 CDR1P51861 262 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 RABGGTBP53611 331 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 GDF10P55107 478 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 NME3Q13232 169 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 XRCC4Q13426 336 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 TTC31Q49AM3 519 aaPredicted RBP13.57□□□□□ -0.24
SNU13-203ENST00000401959 EFHC2Q5JST6 749 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 ZC3H18Q86VM9 953 aaKnown RBP13.57□□□□□ -0.24
SNU13-203ENST00000401959 CDKL3Q8IVW4 592 aaPredicted RBP13.57□□□□□ -0.24
SNU13-203ENST00000401959 PPIL6Q8IXY8 311 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 FAM71DQ8N9W8 422 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 SLC7A14Q8TBB6 771 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 NTAN1Q96AB6 310 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 CSPG4P5Q96PW8 444 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 COLEC11Q9BWP8 271 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 ROPN1BQ9BZX4 212 aaPredicted RBP13.57□□□□□ -0.24
SNU13-203ENST00000401959 PHACTR1Q9C0D0 580 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 ZCWPW1Q9H0M4 648 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 ROPN1Q9HAT0 212 aaPredicted RBP13.57□□□□□ -0.24
SNU13-203ENST00000401959 DNAJB4Q9UDY4 337 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 PRG3Q9Y2Y8 225 aaPredicted RBP13.57□□□□□ -0.24
SNU13-203ENST00000401959 HEY1Q9Y5J3 304 aa13.57□□□□□ -0.24
SNU13-203ENST00000401959 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.56□□□□□ -0.24
SNU13-203ENST00000401959 NCAM1P13591 858 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 NR1D1P20393 614 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 PITX1P78337 314 aaPredicted RBP13.56□□□□□ -0.24
SNU13-203ENST00000401959 SKOR1P84550 965 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 NFE2Q16621 373 aaPredicted RBP13.56□□□□□ -0.24
SNU13-203ENST00000401959 C6orf118Q5T5N4 469 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 EMC10Q5UCC4 262 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 ICE2Q659A1 982 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 KDM7AQ6ZMT4 941 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 BZW1Q7L1Q6 419 aaKnown RBP13.56□□□□□ -0.24
SNU13-203ENST00000401959 BEND5Q7L4P6 421 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 BHLHA9Q7RTU4 235 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 ANKRD33Q7Z3H0 272 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 NPAS4Q8IUM7 802 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 SH2D3CQ8N5H7 860 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 ARFGAP2Q8N6H7 521 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 PRCCQ92733 491 aaPredicted RBP13.56□□□□□ -0.24
SNU13-203ENST00000401959 TTC25Q96NG3 672 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 CASD1Q96PB1 797 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 RBM15Q96T37 977 aaKnown RBP eCLIP13.56□□□□□ -0.246e-8■■■□□ 14.7
SNU13-203ENST00000401959 MRPL9Q9BYD2 267 aaKnown RBP13.56□□□□□ -0.24
SNU13-203ENST00000401959 C10orf88Q9H8K7 445 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 NINJ2Q9NZG7 142 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 BCCIPQ9P287 314 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNU13-203ENST00000401959 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
SNU13-203ENST00000401959 USP3Q9Y6I4 520 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 VWA8A3KMH1 1905 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 MYO16Q9Y6X6 1858 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 SYNJ2BP-COX16A0A087WUM0 186 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 DCDC2CA8MYV0 355 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 CXCL10P02778 98 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 MAGEA4P43358 317 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 SCAPQ12770 1279 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 ARL13BQ3SXY8 428 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 C4orf22Q6V702 233 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 SLC39A5Q6ZMH5 540 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 CENPUQ71F23 418 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 RTP4Q96DX8 246 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 PGM2Q96G03 612 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 FUBP3Q96I24 572 aaKnown RBP eCLIP13.56□□□□□ -0.243e-8■□□□□ 9.4
SNU13-203ENST00000401959 TMEM175Q9BSA9 504 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 STMN4Q9H169 189 aaPredicted RBP13.56□□□□□ -0.24
SNU13-203ENST00000401959 HIPK3Q9H422 1215 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 PIGVQ9NUD9 493 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 DNAJC17Q9NVM6 304 aaKnown RBP13.56□□□□□ -0.24
SNU13-203ENST00000401959 COX16Q9P0S2 106 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 PAK5Q9P286 719 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 ADAM28Q9UKQ2 775 aa13.56□□□□□ -0.24
SNU13-203ENST00000401959 FNDC1Q4ZHG4 1894 aaPredicted RBP13.56□□□□□ -0.24
SNU13-203ENST00000401959 ZNF638Q14966 1978 aaKnown RBP13.55□□□□□ -0.24
SNU13-203ENST00000401959 TET1Q8NFU7 2136 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 A0A087WUV0 522 aaPredicted RBP13.55□□□□□ -0.24
SNU13-203ENST00000401959 RASGRF2O14827 1237 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 TRIM66O15016 1216 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 EIF3HO15372 352 aaKnown RBP eCLIP13.55□□□□□ -0.24
SNU13-203ENST00000401959 KCNN4O15554 427 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 ACSL3O95573 720 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 ALDH2P05091 517 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 GOT1P17174 413 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 ADRA1BP35368 520 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 GRIK1P39086 918 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms