RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TKTL2Q9H0I9 626 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 C20orf96Q9NUD7 363 aaPredicted RBP14.51□□□□□ -0.09
SCAF4-202ENST00000399804 PCDHB5Q9Y5E4 795 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 LY75O60449 1722 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 SDR42E2A6NKP2 422 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 PPEF2O14830 753 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 RNF135Q8IUD6 432 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 PPFIBP2Q8ND30 876 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 FNIP1Q8TF40 1166 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 SKA2Q8WVK7 121 aaPredicted RBP14.51□□□□□ -0.09
SCAF4-202ENST00000399804 NFKBIZQ9BYH8 718 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 HAPLN2Q9GZV7 340 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 SLC12A8A0AV02 714 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 DCTN3O75935 186 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 NAPEPLDQ6IQ20 393 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 LPIN3Q9BQK8 851 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 SENP6Q9GZR1 1112 aaPredicted RBP14.5□□□□□ -0.09
SCAF4-202ENST00000399804 TXLNGQ9NUQ3 528 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 RRN3Q9NYV6 651 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 IGKV6-21A0A0C4DH24 114 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 NCF2P19878 526 aaPredicted RBP14.5□□□□□ -0.09
SCAF4-202ENST00000399804 XPAP23025 273 aaPredicted RBP14.5□□□□□ -0.09
SCAF4-202ENST00000399804 HARS2P49590 506 aaKnown RBP14.5□□□□□ -0.09
SCAF4-202ENST00000399804 SERPINB9P50453 376 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 ICE2Q659A1 982 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 ELMOD1Q8N336 334 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 ATP6V0D2Q8N8Y2 350 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 NETO2Q8NC67 525 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 NRDE2Q9H7Z3 1164 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 ESRRAP11474 423 aaPredicted RBP14.5□□□□□ -0.09
SCAF4-202ENST00000399804 MATKP42679 507 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 GPD2P43304 727 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 NR2C2P49116 596 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 CLCNKBP51801 687 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 ARFIP2P53365 341 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 NOMO2Q5JPE7 1267 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 PACS2Q86VP3 889 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 RASAL3Q86YV0 1011 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 CCNYL1Q8N7R7 359 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 BHMTQ93088 406 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 MYLPFQ96A32 169 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 GRAMD1AQ96CP6 724 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 PGM2Q96G03 612 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 CTNNAL1Q9UBT7 734 aa14.5□□□□□ -0.09
SCAF4-202ENST00000399804 USP15Q9Y4E8 981 aaPredicted RBP14.5□□□□□ -0.09
SCAF4-202ENST00000399804 ITGAVP06756 1048 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 PPM1FP49593 454 aaPredicted RBP14.49□□□□□ -0.09
SCAF4-202ENST00000399804 CCL23P55773 120 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 MRPS5P82675 430 aaKnown RBP14.49□□□□□ -0.09
SCAF4-202ENST00000399804 ELAVL2Q12926 359 aaKnown RBP14.49□□□□□ -0.09
SCAF4-202ENST00000399804 TUSC3Q13454 348 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 KLC3Q6P597 504 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 ZNF572Q7Z3I7 529 aaPredicted RBP14.49□□□□□ -0.09
SCAF4-202ENST00000399804 FAM35AQ86V20 835 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 UNC45BQ8IWX7 931 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 HDAC11Q96DB2 347 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 UBXN6Q9BZV1 441 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 CACNG4Q9UBN1 327 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 H7C4K7 107 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 RNF103O00237 685 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 XPO1O14980 1071 aaKnown RBP14.49□□□□□ -0.09
SCAF4-202ENST00000399804 PSMD3O43242 534 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 PIAS1O75925 651 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 CD48P09326 243 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 GOT1P17174 413 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 CDKN2BP42772 138 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 PAPOLAP51003 745 aaKnown RBP14.49□□□□□ -0.09
SCAF4-202ENST00000399804 RPL10AP62906 217 aaKnown RBP14.49□□□□□ -0.09
SCAF4-202ENST00000399804 MAMDC4Q6UXC1 1216 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 STKLD1Q8NE28 680 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 TMEM106CQ9BVX2 250 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 TTC39BQ5VTQ0 682 aaPredicted RBP14.49□□□□□ -0.09
SCAF4-202ENST00000399804 PPHLN1Q8NEY8 458 aaKnown RBP14.49□□□□□ -0.09
SCAF4-202ENST00000399804 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.49□□□□□ -0.092e-6■■■■■ 54.9
SCAF4-202ENST00000399804 SGIP1Q9BQI5 828 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 TRMT13Q9NUP7 481 aaKnown RBP14.49□□□□□ -0.09
SCAF4-202ENST00000399804 ARL2BPQ9Y2Y0 163 aa14.49□□□□□ -0.09
SCAF4-202ENST00000399804 AP3B1O00203 1094 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 POU5F1Q01860 360 aaKnown RBP14.48□□□□□ -0.09
SCAF4-202ENST00000399804 SOWAHAQ2M3V2 549 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 TFAP2DQ7Z6R9 452 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 CFAP61Q8NHU2 1237 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 PTPRN2Q92932 1015 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 MS4A4AQ96JQ5 239 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 FAM111AQ96PZ2 611 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 PCDH18Q9HCL0 1135 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 OR12D3Q9UGF7 316 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 DNAJB2P25686 324 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 PTP4A2Q12974 167 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 C15orf39Q6ZRI6 1047 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 FBXO44Q9H4M3 255 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 SLC24A2Q9UI40 661 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 RREB1Q92766 1687 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 SPRP35270 261 aaPredicted RBP14.48□□□□□ -0.09
SCAF4-202ENST00000399804 GRIK3Q13003 919 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 RAB44Q7Z6P3 723 aaPredicted RBP14.48□□□□□ -0.09
SCAF4-202ENST00000399804 TSPAN18Q96SJ8 248 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 XYLT2Q9H1B5 865 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 NPHS2Q9NP85 383 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms