RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 BMP6P22004 513 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 TBXAS1P24557 533 aaPredicted RBP14.92□□□□□ -0.02
NELFE-201ENST00000375425 CORO1AP31146 461 aaKnown RBP14.92□□□□□ -0.02
NELFE-201ENST00000375425 DHPSP49366 369 aaPredicted RBP14.92□□□□□ -0.02
NELFE-201ENST00000375425 YWHAEP62258 255 aaKnown RBP14.92□□□□□ -0.02
NELFE-201ENST00000375425 BYSLQ13895 437 aaKnown RBP14.92□□□□□ -0.02
NELFE-201ENST00000375425 MAP7D1Q3KQU3 841 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 RNF43Q68DV7 783 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 KLHL10Q6JEL2 608 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 LPCAT2Q7L5N7 544 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 TMEFF1Q8IYR6 380 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 CHPFQ8IZ52 775 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 SPACA7Q96KW9 195 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 DCLK3Q9C098 648 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 LRRC4Q9HBW1 653 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 MARCH2Q9P0N8 246 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 HESX1Q9UBX0 185 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 MBD1Q9UIS9 605 aaPredicted RBP14.92□□□□□ -0.02
NELFE-201ENST00000375425 FBXO10Q9UK96 956 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 AGO1Q9UL18 857 aaKnown RBP14.92□□□□□ -0.02
NELFE-201ENST00000375425 KIAA1257Q9ULG3 409 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 KIAA1549LQ6ZVL6 1849 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 MYO18AQ92614 2054 aaKnown RBP14.92□□□□□ -0.02
NELFE-201ENST00000375425 A0A1W2PQF6 199 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 SLC12A8A0AV02 714 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 PPP1R3GB7ZBB8 358 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 PMM2O15305 246 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 PENKP01210 267 aaPredicted RBP14.92□□□□□ -0.02
NELFE-201ENST00000375425 VDRP11473 427 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 KCNA4P22459 653 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 PPP1R2P41236 205 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 BCAT1P54687 386 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 BST2Q10589 180 aaKnown RBP14.92□□□□□ -0.02
NELFE-201ENST00000375425 CCDC40Q4G0X9 1142 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 SDE2Q6IQ49 451 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 CYP2U1Q7Z449 544 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 DENND1CQ8IV53 801 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 UBR7Q8N806 425 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 PIGKQ92643 395 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 STRIP2Q9ULQ0 834 aa14.92□□□□□ -0.02
NELFE-201ENST00000375425 PATE3B3GLJ2 98 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 WASH3PC4AMC7 463 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 RNF225M0QZC1 329 aaPredicted RBP14.91□□□□□ -0.02
NELFE-201ENST00000375425 O00370 1275 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 KHNYNO15037 678 aaKnown RBP14.91□□□□□ -0.02
NELFE-201ENST00000375425 GADD45BO75293 160 aaPredicted RBP14.91□□□□□ -0.02
NELFE-201ENST00000375425 GABRG2P18507 467 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 PTGER3P43115 390 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 FYB2Q5VWT5 728 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 KIAA1211LQ6NV74 962 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 TTI2Q6NXR4 508 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 TMEM270Q6UE05 265 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 BHLHA9Q7RTU4 235 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 NELFBQ8WX92 580 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 ERLEC1Q96DZ1 483 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 IPO9Q96P70 1041 aaKnown RBP14.91□□□□□ -0.02
NELFE-201ENST00000375425 EDEM2Q9BV94 578 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 PCDHB4Q9Y5E5 795 aa14.91□□□□□ -0.02
NELFE-201ENST00000375425 LNP1A1A4G5 178 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 YJEFN3A6XGL0 299 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 E7ENQ6 273 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 BIN1O00499 593 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 ZBTB24O43167 697 aaPredicted RBP14.9□□□□□ -0.02
NELFE-201ENST00000375425 IRX4P78413 519 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 ADIGQ0VDE8 80 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 CETN1Q12798 172 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 MORC3Q14149 939 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 PKDCCQ504Y2 493 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 SPDYCQ5MJ68 293 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 BSPRYQ5W0U4 402 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 LCLAT1Q6UWP7 414 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 ARMCX6Q7L4S7 300 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 PPM1KQ8N3J5 372 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 LMO3Q8TAP4 145 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 IPO4Q8TEX9 1081 aaKnown RBP14.9□□□□□ -0.02
NELFE-201ENST00000375425 TFAP2BQ92481 460 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 EDEM1Q92611 657 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 KAT5Q92993 513 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 CNTNAP3BQ96NU0 1288 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 NT5C1BQ96P26 610 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 GABRG3Q99928 467 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 LSM14BQ9BX40 385 aaKnown RBP14.9□□□□□ -0.02
NELFE-201ENST00000375425 CNTNAP3Q9BZ76 1288 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 CD248Q9HCU0 757 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 TMEM74BQ9NUR3 256 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 CACNA2D2Q9NY47 1150 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 CALCOCO1Q9P1Z2 691 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 SLC27A6Q9Y2P4 619 aa14.9□□□□□ -0.02
NELFE-201ENST00000375425 BICDL2A1A5D9 508 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 C4orf47A7E2U8 309 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 GFRA2O00451 464 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 PAEPP09466 180 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 LCP1P13796 627 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 MFAP3P55082 362 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 STX17P56962 302 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 TRIP4Q15650 581 aaPredicted RBP14.89□□□□□ -0.03
NELFE-201ENST00000375425 CNGA2Q16280 664 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 GEN1Q17RS7 908 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 FOXR2Q6PJQ5 311 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 RRAGAQ7L523 313 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms