RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CEP104O60308 925 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PCDHGA12O60330 932 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SEC22BO75396 215 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PAHP00439 452 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 THP07101 528 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 HEXBP07686 556 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SRGAP2CP0DJJ0 459 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 HNRNPCL4P0DMR1 293 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 TOP1P11387 765 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 CKMT1AP12532 417 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ITGA4P13612 1032 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ALOX15P16050 662 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 HOXA11P31270 313 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 KRT2P35908 639 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 MATR3P43243 847 aaKnown RBP eCLIP3.74□□□□□ -1.818e-7■■■■■ 31.9
ECHDC1-205ENST00000368295 CCR10P46092 362 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 TUBP50607 506 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 MAPK10P53779 464 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 NR1H2P55055 460 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PPARDQ03181 441 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 GALNT1Q10472 559 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 NMIQ13287 307 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 TRPC3Q13507 836 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PROSER3Q2NL68 480 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 C15orf59Q2T9L4 293 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 C2orf76Q3KRA6 126 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 HSF5Q4G112 596 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 FAM209BQ5JX69 171 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 RNF220Q5VTB9 566 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 HAUS3Q68CZ6 603 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 WDR73Q6P4I2 378 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 POMZP3Q6PJE2 187 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 DTX1Q86Y01 620 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 GALNT15Q8N3T1 639 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 CCDC33Q8N5R6 958 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SPERTQ8NA61 448 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 CCHCR1Q8TD31 782 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ASB11Q8WXH4 323 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SOCS4Q8WXH5 440 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 HSPH1Q92598 858 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 NRBF2Q96F24 287 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 C8orf76Q96K31 380 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 CITED2Q99967 270 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ACAT2Q9BWD1 397 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 APOL5Q9BWW9 433 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ZNF341Q9BYN7 854 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PRDM14Q9GZV8 571 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 BTBD1Q9H0C5 482 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 WNT8AQ9H1J5 351 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 MAGEH1Q9H213 219 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 BHMT2Q9H2M3 363 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 TNMDQ9H2S6 317 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 INCENPQ9NQS7 918 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 KRT84Q9NSB2 600 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 DONSONQ9NYP3 566 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 MIS18AQ9NYP9 233 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SUCLA2Q9P2R7 463 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 UBA2Q9UBT2 640 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 HOOK1Q9UJC3 728 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PCDHB10Q9UN67 800 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 L1RE1Q9UN81 338 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 JRKLQ9Y4A0 524 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PCDHGB5Q9Y5G0 923 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PCDHGA9Q9Y5G4 932 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PCDHGA8Q9Y5G5 932 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PCDHGA7Q9Y5G6 932 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PCDHGA6Q9Y5G7 932 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PCDHGA3Q9Y5H0 932 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PCDHGA2Q9Y5H1 932 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ST14Q9Y5Y6 855 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 DDX49Q9Y6V7 483 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ECM29Q5VYK3 1845 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 MED23Q9ULK4 1368 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SETD2Q9BYW2 2564 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 CYP2D7A0A087X1C5 515 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ARPC4-TTLL3A0A0A6YYG9 625 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ANKRD34BA5PLL1 514 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 MYADML2A6NDP7 307 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 DBX1A6NMT0 343 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 RHPN2P1A8MT19 583 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 IKBKBO14920 756 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SIGLEC6O43699 453 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PRPSAP2O60256 369 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 MSCO60682 206 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SLITRK3O94933 977 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 RTN3O95197 1032 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 COL6A2P12110 1019 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ALAS1P13196 640 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ETV1P50549 477 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 GPC3P51654 580 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 AFF3P51826 1226 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SLC26A5P58743 744 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 RELQ04864 619 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 MAPK7Q13164 816 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 EFR3AQ14156 821 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ERV3-1Q14264 604 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PLS1Q14651 629 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 TAF5Q15542 800 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ALG11Q2TAA5 492 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms