RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TJP3O95049 919 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 FYNP06241 537 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 KDELR1P24390 212 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 DNAJB1P25685 340 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 FNTAP49354 379 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 SARNPP82979 210 aaKnown RBP12.56□□□□□ -0.4
USF1-203ENST00000368021 DHX34Q14147 1143 aaKnown RBP12.56□□□□□ -0.4
USF1-203ENST00000368021 PDK2Q15119 407 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 TUBB8Q3ZCM7 444 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 KCNT1Q5JUK3 1230 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 RSPO2Q6UXX9 243 aaPredicted RBP12.56□□□□□ -0.4
USF1-203ENST00000368021 GPR65Q8IYL9 337 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 GIMAP7Q8NHV1 300 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 NDRG1Q92597 394 aaKnown RBP12.56□□□□□ -0.4
USF1-203ENST00000368021 PGAP3Q96FM1 320 aaPredicted RBP12.56□□□□□ -0.4
USF1-203ENST00000368021 ARFGAP3Q9NP61 516 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 KLHL11Q9NVR0 708 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 SPG21Q9NZD8 308 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 DMGDHQ9UI17 866 aaKnown RBP12.56□□□□□ -0.4
USF1-203ENST00000368021 ATXN2Q99700 1313 aaKnown RBP12.56□□□□□ -0.4
USF1-203ENST00000368021 ZNF487B1APH4 448 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 PI4K2BG5E9Z4 385 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 CAPN9O14815 690 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 RB1P06400 928 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 TNFRSF8P28908 595 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 OAS2P29728 719 aaKnown RBP12.55□□□□□ -0.4
USF1-203ENST00000368021 ARSEP51690 589 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 DSG1Q02413 1049 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 PSMD5Q16401 504 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 KIAA1841Q6NSI8 718 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 HFE2Q6ZVN8 426 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 ANKS1BQ7Z6G8 1248 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 TADA2BQ86TJ2 420 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 DDX53Q86TM3 631 aaKnown RBP12.55□□□□□ -0.4
USF1-203ENST00000368021 PSTKQ8IV42 348 aaKnown RBP12.55□□□□□ -0.4
USF1-203ENST00000368021 MAP7D3Q8IWC1 876 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 NUP93Q8N1F7 819 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 ATAD1Q8NBU5 361 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 KCTD6Q8NC69 237 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 SPPL3Q8TCT6 385 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 MICAL1Q8TDZ2 1067 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 HDAC7Q8WUI4 952 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 POF1BQ8WVV4 589 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 RIN2Q8WYP3 895 aaPredicted RBP12.55□□□□□ -0.4
USF1-203ENST00000368021 ITFG2Q969R8 447 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 MAGOHBQ96A72 148 aaKnown RBP12.55□□□□□ -0.4
USF1-203ENST00000368021 CEP295NLQ96MC4 621 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 HERPUD2Q9BSE4 406 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 HERC2P3Q9BVR0 1158 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 ADAM33Q9BZ11 813 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 FBXO44Q9H4M3 255 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 IL37Q9NZH6 218 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 AMACRQ9UHK6 382 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 TFE3P19532 575 aaPredicted RBP12.55□□□□□ -0.4
USF1-203ENST00000368021 SULT1E1P49888 294 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 VSNL1P62760 191 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 CAMK1Q14012 370 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 RAB6CQ53S08 254 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 ERMARDQ5T6L9 678 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 OTUD1Q5VV17 481 aaPredicted RBP12.55□□□□□ -0.4
USF1-203ENST00000368021 SYPL2Q5VXT5 272 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 SCYL2Q6P3W7 929 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 PRSS55Q6UWB4 352 aaPredicted RBP12.55□□□□□ -0.4
USF1-203ENST00000368021 SPATS2Q86XZ4 545 aaKnown RBP12.55□□□□□ -0.4
USF1-203ENST00000368021 SCN4BQ8IWT1 228 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 MAFAQ8NHW3 353 aaPredicted RBP12.55□□□□□ -0.4
USF1-203ENST00000368021 SCAMP5Q8TAC9 235 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 FAM71BQ8TC56 605 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 HNRNPLLQ8WVV9 542 aaKnown RBP12.55□□□□□ -0.4
USF1-203ENST00000368021 HSPH1Q92598 858 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 SLCO2A1Q92959 643 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 SPATA17Q96L03 361 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 PGLYRP2Q96PD5 576 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 HEMGNQ9BXL5 484 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 RAB6CQ9H0N0 254 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.55□□□□□ -0.4
USF1-203ENST00000368021 HSFX1Q9UBD0 423 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 NAALADL1Q9UQQ1 740 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 CDY1Q9Y6F8 540 aa12.55□□□□□ -0.4
USF1-203ENST00000368021 CCDC189A1A4V9 331 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 FAM92AA1XBS5 289 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 FAM187AA6NFU0 413 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 BHMG1C9JSJ3 638 aaPredicted RBP12.54□□□□□ -0.4
USF1-203ENST00000368021 ERLIN1O75477 346 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 HEXIM1O94992 359 aaKnown RBP12.54□□□□□ -0.4
USF1-203ENST00000368021 VNN2O95498 520 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 F9P00740 461 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 HAPLN1P10915 354 aaPredicted RBP12.54□□□□□ -0.4
USF1-203ENST00000368021 NCAM1P13591 858 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 RDXP35241 583 aaKnown RBP12.54□□□□□ -0.4
USF1-203ENST00000368021 IRS1P35568 1242 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 COILP38432 576 aaPredicted RBP12.54□□□□□ -0.4
USF1-203ENST00000368021 GLUD2P49448 558 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 AIF1P55008 147 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 CDH6P55285 790 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 SLC7A5Q01650 507 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 DR1Q01658 176 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 ROR1Q01973 937 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 SKIV2LQ15477 1246 aaKnown RBP12.54□□□□□ -0.4
USF1-203ENST00000368021 DPYSL2Q16555 572 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms