RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 DEPDC1Q5TB30 811 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 ABLIM2Q6H8Q1 611 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 TTLL10Q6ZVT0 673 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 COLGALT2Q8IYK4 626 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 CPEB3Q8NE35 698 aaKnown RBP6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 OR1N1Q8NGS0 311 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 FAM136AQ96C01 138 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 GRAMD1AQ96CP6 724 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 ZBTB45Q96K62 511 aaPredicted RBP6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 NAP1L4Q99733 375 aaKnown RBP6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 AMBRA1Q9C0C7 1298 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 EPS8L2Q9H6S3 715 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 UNKLQ9H9P5 680 aaKnown RBP6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 INTS13Q9NVM9 706 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 RAPGEFL1Q9UHV5 662 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 HERC5Q9UII4 1024 aaKnown RBP6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 SNX14Q9Y5W7 946 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 SBF2Q86WG5 1849 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 ABCC6O95255 1503 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 ROCK2O75116 1388 aaKnown RBP6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 OR2W5A6NFC9 320 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 ADM5C9JUS6 153 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 AGPSO00116 658 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 IRAK2O43187 625 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 CDKL5O76039 1030 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 VIPP01282 170 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 GYS1P13807 737 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 DDX6P26196 483 aaKnown RBP eCLIP6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 ZFP36P26651 326 aaKnown RBP6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 PRKAR1BP31321 381 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 UQCRC1P31930 480 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 BCAT1P54687 386 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 ALDH18A1P54886 795 aaKnown RBP6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 SP2Q02086 613 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 ATP1A4Q13733 1029 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 TRIM71Q2Q1W2 868 aaKnown RBP6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 FBLN7Q53RD9 439 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 KLHL17Q6TDP4 642 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 RFX8Q6ZV50 586 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 RASGRP3Q8IV61 690 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 ABRAQ8N0Z2 381 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 PAF1Q8N7H5 531 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 CHST13Q8NET6 341 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 OTUD7AQ8TE49 926 aaPredicted RBP6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 PNISRQ8TF01 805 aaKnown RBP6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 ATG4AQ8WYN0 398 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 ZDHHC12Q96GR4 267 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 ADAM2Q99965 735 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 FAM167BQ9BTA0 163 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 ACTRT3Q9BYD9 372 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 TPSD1Q9BZJ3 242 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 UBA5Q9GZZ9 404 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 KLC2Q9H0B6 622 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 MLXIPQ9HAP2 919 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 HELLSQ9NRZ9 838 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 RRN3Q9NYV6 651 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 LPAR3Q9UBY5 353 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 MAP3K19Q56UN5 1328 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 KIAA1210Q9ULL0 1709 aa6.45□□□□□ -1.38
RNU4-39P-201ENST00000362455 A0A1W2PP64 1363 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 ANKRD36BQ8N2N9 1353 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 MUSKO15146 869 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 PPM1DO15297 605 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 DNPH1O43598 174 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 WDHD1O75717 1129 aaPredicted RBP6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 NTSR2O95665 410 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 LMNAP02545 664 aaKnown RBP6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 NR4A1P22736 598 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 HOXC9P31274 260 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 PNLIPRP1P54315 467 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 NFIXQ14938 502 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 ERICH6BQ5W0A0 696 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 ARMC6Q6NXE6 501 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 CYP26C1Q6V0L0 522 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 ZNF276Q8N554 614 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 IL17DQ8TAD2 202 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 OSCP1Q8WVF1 389 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 RUBCNQ92622 972 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 HIST1H2AAQ96QV6 131 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 TESK2Q96S53 571 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 TP63Q9H3D4 680 aaPredicted RBP6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 CEP72Q9P209 647 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 SRP68Q9UHB9 627 aaKnown RBP6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 CCNL1Q9UK58 526 aaPredicted RBP6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 LZTS1Q9Y250 596 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 ADCY9O60503 1353 aa6.44□□□□□ -1.38
RNU4-39P-201ENST00000362455 ATP10DQ9P241 1426 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 NHSQ6T4R5 1651 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 SHANK3Q9BYB0 1731 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 UNC119BA6NIH7 251 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 K7ESM1 405 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 ACTL6BO94805 426 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 PDHA1P08559 390 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 PPP3CBP16298 524 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 BMPR1AP36894 532 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 GATMP50440 423 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 POLE2P56282 527 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 SLC25A3Q00325 362 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 TIAL1Q01085 375 aaKnown RBP eCLIP6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 PLP2Q04941 152 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms