RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ZBTB11O95625 1053 aaPredicted RBP16.54■□□□□ 0.24
NPHP3-201ENST00000337331 TAS2R42Q7RTR8 314 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 ADNPQ9H2P0 1102 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 ARMC7Q9H6L4 198 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 HACD3Q9P035 362 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 PABPC4LP0CB38 370 aaKnown RBP16.54■□□□□ 0.24
NPHP3-201ENST00000337331 CAPRIN1Q14444 709 aaKnown RBP16.54■□□□□ 0.24
NPHP3-201ENST00000337331 IMPG1Q17R60 797 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 LRRC55Q6ZSA7 311 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 LRRC57Q8N9N7 239 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 SLC7A6OSQ96CW6 309 aaPredicted RBP16.54■□□□□ 0.24
NPHP3-201ENST00000337331 OMA1Q96E52 524 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 ADAM7Q9H2U9 754 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 ACTL7BQ9Y614 415 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 ITSN1Q15811 1721 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 FAM86B1E9PN63 330 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 IL18RAPO95256 599 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 FAM86B2P0C5J1 330 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 SHMT1P34896 483 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 NLRP11P59045 1033 aaKnown RBP16.54■□□□□ 0.24
NPHP3-201ENST00000337331 ZNF235Q14590 738 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 UGP2Q16851 508 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 EGFL8Q99944 293 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 TMEM121Q9BTD3 319 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 TAS2R14Q9NYV8 317 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 RNF181Q9P0P0 153 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 TUBGCP4Q9UGJ1 667 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 MST1RQ04912 1400 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 PROSCO94903 275 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 BCL10O95999 233 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 MUTP22033 750 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 FDFT1P37268 417 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 MPP2Q14168 576 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 MAPRE2Q15555 327 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 TMEM214Q6NUQ4 689 aaKnown RBP16.54■□□□□ 0.24
NPHP3-201ENST00000337331 KLHL35Q6PF15 583 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 DENND5BQ6ZUT9 1274 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 IRF2BP2Q7Z5L9 587 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 IFNEQ86WN2 208 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 GRHL1Q9NZI5 618 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 SCHIP1Q9P0W5 487 aaPredicted RBP16.54■□□□□ 0.24
NPHP3-201ENST00000337331 TMX2Q9Y320 296 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 ZNF839A8K0R7 811 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 F8W8V4 182 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 NKRFO15226 690 aaKnown RBP eCLIP16.53■□□□□ 0.24
NPHP3-201ENST00000337331 ZMPSTE24O75844 475 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 POLBP06746 335 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 NEDD8Q15843 81 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 SAPCD2Q86UD0 394 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 ZNF398Q8TD17 642 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 BORCS5Q969J3 196 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 MYOZ2Q9NPC6 264 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 OLA1Q9NTK5 396 aaKnown RBP16.53■□□□□ 0.24
NPHP3-201ENST00000337331 GGA3Q9NZ52 723 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 DLGAP3O95886 979 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 C6orf222P0C671 652 aaPredicted RBP16.53■□□□□ 0.24
NPHP3-201ENST00000337331 GARTP22102 1010 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 INPP1P49441 399 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 CARTPTQ16568 116 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 ASTE1Q2TB18 679 aaPredicted RBP16.53■□□□□ 0.24
NPHP3-201ENST00000337331 GJC2Q5T442 439 aaPredicted RBP16.53■□□□□ 0.24
NPHP3-201ENST00000337331 FBXO36Q8NEA4 188 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 OR6J1Q8NGC5 347 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 GATA6Q92908 595 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 USP13Q92995 863 aaPredicted RBP16.53■□□□□ 0.24
NPHP3-201ENST00000337331 HTR3EA5X5Y0 456 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 SYCE1LA8MT33 242 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 TCF7P36402 384 aaPredicted RBP16.53■□□□□ 0.24
NPHP3-201ENST00000337331 OXCT1P55809 520 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 TBCCQ15814 346 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 TFDP3Q5H9I0 405 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 TTC39BQ5VTQ0 682 aaPredicted RBP16.53■□□□□ 0.24
NPHP3-201ENST00000337331 ELMO3Q96BJ8 720 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 OSBPL6Q9BZF3 934 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 SEMA6AQ9H2E6 1030 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 POLIQ9UNA4 740 aa16.53■□□□□ 0.24
NPHP3-201ENST00000337331 HBP1O60381 514 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 TM7SF2O76062 418 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 CAPN1P07384 714 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 KCNA2P16389 499 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 RARRES1P49788 294 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 ARHGDIAP52565 204 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 PDK1Q15118 436 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 TMEM119Q4V9L6 283 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 NUP93Q8N1F7 819 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 C2orf69Q8N8R5 385 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 ACTL9Q8TC94 416 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 TMC2Q8TDI7 906 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 PABPC5Q96DU9 382 aaKnown RBP16.52■□□□□ 0.24
NPHP3-201ENST00000337331 FADS3Q9Y5Q0 445 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 TCRBV7S2A1N4TA0A589 114 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 EEF2KO00418 725 aaKnown RBP16.52■□□□□ 0.24
NPHP3-201ENST00000337331 ZBTB39O15060 712 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 ZBTB24O43167 697 aaPredicted RBP16.52■□□□□ 0.24
NPHP3-201ENST00000337331 HADHAP40939 763 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 ENTPD1P49961 510 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 SOX10P56693 466 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 UBAP2LQ14157 1087 aaKnown RBP16.52■□□□□ 0.24
NPHP3-201ENST00000337331 TTC27Q6P3X3 843 aa16.52■□□□□ 0.24
NPHP3-201ENST00000337331 CCDC103Q8IW40 242 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms