RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 LINC00523Q86TU6 105 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 MYO1HQ8N1T3 1032 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 ARMC7Q9H6L4 198 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 RXFP1Q9HBX9 757 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 MOXD2PA6NHM9 499 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 PSTPIP1O43586 416 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 MADCAM1Q13477 382 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 TAF1CQ15572 869 aaPredicted RBP17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 DDR2Q16832 855 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 EDRF1Q3B7T1 1238 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 KIFC1Q9BW19 673 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 TSPOAP1O95153 1857 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 UBDO15205 165 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 EIF3DO15371 548 aaKnown RBP eCLIP17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 HPGDP15428 266 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 ERCC2P18074 760 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 MGAT1P26572 445 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 RGS2P41220 211 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 GEMP55040 296 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 PLCL1Q15111 1095 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 CACTIN-AS1Q8N1I8 211 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 MCRS1Q96EZ8 462 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 TINF2Q9BSI4 451 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 TSEN34Q9BSV6 310 aaKnown RBP17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 ENTPD7Q9NQZ7 604 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 PRKAB1Q9Y478 270 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 POLR1AO95602 1720 aaPredicted RBP17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 ZNF839A8K0R7 811 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 ATP6V1C1P21283 382 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 SCNN1BP51168 640 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 PUDPQ08623 228 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 ZIK1Q3SY52 487 aaPredicted RBP17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 MRNIPQ6NTE8 343 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 KLHL24Q6TFL4 600 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 STK32CQ86UX6 486 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 FNDC5Q8NAU1 212 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 OR6Y1Q8NGX8 325 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 ZNF70Q9UC06 446 aaPredicted RBP17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 PHGDHO43175 533 aaKnown RBP17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 B3GAT3O94766 335 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 ALDH1A2O94788 518 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 CYP11B2P19099 503 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 PKN2Q16513 984 aaKnown RBP17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 UGT3A1Q6NUS8 523 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 SAMD7Q7Z3H4 446 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 PPIEQ9UNP9 301 aaKnown RBP17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 TMEM150BA6NC51 233 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 ETS1P14921 441 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 ZCCHC7Q8N3Z6 543 aaKnown RBP17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 PCDH20Q8N6Y1 951 aaKnown RBP17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 RPA1P27694 616 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 TAF6P49848 677 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 AKR1D1P51857 326 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 FAM45BPQ6NSW5 357 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 CLEC17AQ6ZS10 378 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 NUDT18Q6ZVK8 323 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 RXFP2Q8WXD0 754 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 AP4E1Q9UPM8 1137 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 CYB561D2O14569 222 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 USP12O75317 370 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 RPL21P46778 160 aaKnown RBP17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 CRADDP78560 199 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 MTA3Q9BTC8 594 aa17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 CLEC4MQ9H2X3 399 aaPredicted RBP17.24■□□□□ 0.35
TSPAN3-201ENST00000267970 CPSF1Q10570 1443 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 RIPK2O43353 540 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 NELFEP18615 380 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 ACAT1P24752 427 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 MRPS22P82650 360 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 PPIDQ08752 370 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 LRRC74BQ6ZQY2 392 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 C16orf86Q6ZW13 317 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 PPP2R3CQ969Q6 453 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 F5H5T6 163 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 SCAMP3O14828 347 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 DCXO43602 365 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 ZSCAN5DPP0CG00 497 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 MYL6P60660 151 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 KBTBD12Q3ZCT8 623 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 PERM1Q5SV97 790 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 GLB1LQ6UWU2 654 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 FBXO32Q969P5 355 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 TOR4AQ9NXH8 423 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 SAE1Q9UBE0 346 aaPredicted RBP17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 CYP2F1P24903 491 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 ELK3P41970 407 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 PKN1Q16512 942 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 TAF2Q6P1X5 1199 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 LPCAT1Q8NF37 534 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 TAS1R2Q8TE23 839 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 CDRT15Q96T59 188 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 FCHO1O14526 889 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 BANF1O75531 89 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 ATP6V0D2Q8N8Y2 350 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 NRDE2Q9H7Z3 1164 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 MID1IP1Q9NPA3 183 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 WHRNQ9P202 907 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 ARHGAP20Q9P2F6 1191 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 VANGL2Q9ULK5 521 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 KIF1BO60333 1816 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms