RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 HDAC7Q8WUI4 952 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 SMG7Q92540 1137 aaKnown RBP12.46□□□□□ -0.41
VPS45-212ENST00000611412 CASP10Q92851 521 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 ALS2CR12Q96Q35 445 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 GAS2L1Q99501 681 aaPredicted RBP12.46□□□□□ -0.41
VPS45-212ENST00000611412 ATXN3LQ9H3M9 355 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.46□□□□□ -0.41
VPS45-212ENST00000611412 CLDND1Q9NY35 253 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 EHD2Q9NZN4 543 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 PCSK1NQ9UHG2 260 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 DPP7Q9UHL4 492 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 FANCGO15287 622 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 SPOPO43791 374 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 XYLBO75191 536 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 RHOP08100 348 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 HNRNPA1P09651 372 aaKnown RBP eCLIP12.46□□□□□ -0.42
VPS45-212ENST00000611412 ZDHHC11BP0C7U3 371 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 PTPN2P17706 415 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 CCDC85BQ15834 202 aaPredicted RBP12.46□□□□□ -0.42
VPS45-212ENST00000611412 SLC5A9Q2M3M2 681 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 C10orf120Q5SQS8 335 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 TXNDC8Q6A555 127 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 CC2D1AQ6P1N0 951 aaPredicted RBP12.46□□□□□ -0.42
VPS45-212ENST00000611412 SCYL2Q6P3W7 929 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 SYT10Q6XYQ8 523 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 NYAP1Q6ZVC0 841 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 TAC4Q86UU9 113 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 MIB1Q86YT6 1006 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 ARHGAP18Q8N392 663 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 DQX1Q8TE96 717 aaKnown RBP12.46□□□□□ -0.42
VPS45-212ENST00000611412 CYP2S1Q96SQ9 504 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 CNPY3Q9BT09 278 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 FAM204AQ9H8W3 233 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 ZDHHC7Q9NXF8 308 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 LMCD1Q9NZU5 365 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 UXTQ9UBK9 157 aaPredicted RBP12.46□□□□□ -0.42
VPS45-212ENST00000611412 RASAL2Q9UJF2 1139 aa12.46□□□□□ -0.42
VPS45-212ENST00000611412 DPYSL4O14531 572 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 TLR5O60602 858 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 LRCH4O75427 683 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 C1RP00736 705 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 HOXA9P31269 272 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 TAS2R40P59535 323 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 ADAM15Q13444 863 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 CLUL1Q15846 466 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 SLC25A52Q3SY17 297 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 HABP4Q5JVS0 413 aaKnown RBP12.45□□□□□ -0.42
VPS45-212ENST00000611412 TXNRD3NBQ6F5E7 133 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 C11orf63Q6NUN7 778 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 ELMSAN1Q6PJG2 1045 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 PDZD4Q76G19 769 aaPredicted RBP12.45□□□□□ -0.42
VPS45-212ENST00000611412 PEX26Q7Z412 305 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 TTC16Q8NEE8 873 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 PDZD8Q8NEN9 1154 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 TRIM58Q8NG06 486 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 PPM1EQ8WY54 764 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 ING5Q8WYH8 240 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 ZNF592Q92610 1267 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 ACSF2Q96CM8 615 aaPredicted RBP12.45□□□□□ -0.42
VPS45-212ENST00000611412 NPY6RQ99463 290 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 SFXN1Q9H9B4 322 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 DDIT4Q9NX09 232 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 DNAI1Q9UI46 699 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 STAP1Q9ULZ2 295 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 C5orf42Q9H799 3197 aa12.45□□□□□ -0.42
VPS45-212ENST00000611412 TBX10O75333 385 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 TRUB2O95900 331 aaKnown RBP12.44□□□□□ -0.42
VPS45-212ENST00000611412 HMBSP08397 361 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 RALAP11233 206 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 MARCKSL1P49006 195 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 HDAC4P56524 1084 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 DEUP1Q05D60 604 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 PIGHQ14442 188 aaPredicted RBP12.44□□□□□ -0.42
VPS45-212ENST00000611412 ATP13A4Q4VNC1 1196 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 PABPC1LQ4VXU2 614 aaKnown RBP12.44□□□□□ -0.42
VPS45-212ENST00000611412 ANKRD54Q6NXT1 300 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 SYCE2Q6PIF2 218 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 ARCQ7LC44 396 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 NT5DC3Q86UY8 548 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 FAM131BQ86XD5 332 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.44□□□□□ -0.42
VPS45-212ENST00000611412 SHKBP1Q8TBC3 707 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 FNIP1Q8TF40 1166 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 SLC22A12Q96S37 553 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 PSMB7Q99436 277 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 CDX2Q99626 313 aaPredicted RBP12.44□□□□□ -0.42
VPS45-212ENST00000611412 NACA2Q9H009 215 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 RNF38Q9H0F5 515 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 ZWILCHQ9H900 591 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 TMPRSS4Q9NRS4 437 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 PIGVQ9NUD9 493 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 KLHL11Q9NVR0 708 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 CLIC5Q9NZA1 410 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 CLEC1BQ9P126 229 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 COCHO43405 550 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 RNF8O76064 485 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 ATP1A1P05023 1023 aaKnown RBP12.44□□□□□ -0.42
VPS45-212ENST00000611412 MIPP30301 263 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 PTPN9P43378 593 aa12.44□□□□□ -0.42
VPS45-212ENST00000611412 PSEN1P49768 467 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms