RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 MIPP30301 263 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 NRIP1P48552 1158 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 RWDD2BP57060 319 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 DEUP1Q05D60 604 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 MYO7AQ13402 2215 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 MSANTD2Q6P1R3 559 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 ADGRD2Q7Z7M1 963 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 LEMD2Q8NC56 503 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 PBKQ96KB5 322 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 GCNAQ96QF7 691 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 SMOC2Q9H3U7 446 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 NSUN3Q9H649 340 aaKnown RBP19.38■□□□□ 0.69
SSBP4-212ENST00000601919 NMUR1Q9HB89 426 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 ASAH2Q9NR71 780 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 DZANK1Q9NVP4 752 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 DDX56Q9NY93 547 aaKnown RBP19.38■□□□□ 0.69
SSBP4-212ENST00000601919 USP18Q9UMW8 372 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 PACSIN2Q9UNF0 486 aaPredicted RBP19.38■□□□□ 0.69
SSBP4-212ENST00000601919 COLQQ9Y215 455 aaPredicted RBP19.38■□□□□ 0.69
SSBP4-212ENST00000601919 MYO9BQ13459 2157 aa19.37■□□□□ 0.69
SSBP4-212ENST00000601919 CES2O00748 559 aa19.37■□□□□ 0.69
SSBP4-212ENST00000601919 KCNK3O14649 394 aa19.37■□□□□ 0.69
SSBP4-212ENST00000601919 URI1O94763 535 aaPredicted RBP19.37■□□□□ 0.69
SSBP4-212ENST00000601919 TRUB2O95900 331 aaKnown RBP19.37■□□□□ 0.69
SSBP4-212ENST00000601919 TUBP50607 506 aa19.37■□□□□ 0.69
SSBP4-212ENST00000601919 AIF1P55008 147 aa19.37■□□□□ 0.69
SSBP4-212ENST00000601919 BOLA3Q53S33 107 aa19.37■□□□□ 0.69
SSBP4-212ENST00000601919 ZFYVE27Q5T4F4 411 aa19.37■□□□□ 0.69
SSBP4-212ENST00000601919 DQX1Q8TE96 717 aaKnown RBP19.37■□□□□ 0.69
SSBP4-212ENST00000601919 CASP10Q92851 521 aa19.37■□□□□ 0.69
SSBP4-212ENST00000601919 SERPINB11Q96P15 392 aa19.37■□□□□ 0.69
SSBP4-212ENST00000601919 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.37■□□□□ 0.69
SSBP4-212ENST00000601919 DDIT4Q9NX09 232 aa19.37■□□□□ 0.69
SSBP4-212ENST00000601919 ZNF840PA6NDX5 716 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 RFXAPO00287 272 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 FANCGO15287 622 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 CCL16O15467 120 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 DDX3YO15523 660 aaKnown RBP19.36■□□□□ 0.69
SSBP4-212ENST00000601919 PTPN2P17706 415 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 CDC25CP30307 473 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 CETN2P41208 172 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 DNA2P51530 1060 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 KPNA1P52294 538 aaPredicted RBP19.36■□□□□ 0.69
SSBP4-212ENST00000601919 HDAC4P56524 1084 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 TAS2R40P59535 323 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 NME3Q13232 169 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 NNTQ13423 1086 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 C10orf120Q5SQS8 335 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 HECTD3Q5T447 861 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 SH3PXD2AQ5TCZ1 1133 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 SCYL2Q6P3W7 929 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 KLHDC10Q6PID8 442 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 BNIPLQ7Z465 357 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 KATNAL2Q8IYT4 538 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 TEKT4Q8WW24 435 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 OSBPL9Q96SU4 736 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 NACA2Q9H009 215 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 CARD9Q9H257 536 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.36■□□□□ 0.69
SSBP4-212ENST00000601919 PCSK1NQ9UHG2 260 aa19.36■□□□□ 0.69
SSBP4-212ENST00000601919 TLR5O60602 858 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 SLC2A3P11169 496 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 ATP5C1P36542 298 aaKnown RBP19.35■□□□□ 0.69
SSBP4-212ENST00000601919 PEX5P50542 639 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 AMPD2Q01433 879 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 SLC25A11Q02978 314 aaKnown RBP19.35■□□□□ 0.69
SSBP4-212ENST00000601919 CLUL1Q15846 466 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 ARL13BQ3SXY8 428 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 DAB2IPQ5VWQ8 1189 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 TAC4Q86UU9 113 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 CPNE8Q86YQ8 564 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 PSTKQ8IV42 348 aaKnown RBP19.35■□□□□ 0.69
SSBP4-212ENST00000601919 ARFGAP1Q8N6T3 406 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 MRPS31Q92665 395 aaKnown RBP19.35■□□□□ 0.69
SSBP4-212ENST00000601919 KRT35Q92764 455 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 PRKD2Q9BZL6 878 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 ZWILCHQ9H900 591 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 SFXN1Q9H9B4 322 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 RRAGDQ9NQL2 400 aaPredicted RBP19.35■□□□□ 0.69
SSBP4-212ENST00000601919 OSER1Q9NX31 292 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 RNF14Q9UBS8 474 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 DNMT3LQ9UJW3 386 aa19.35■□□□□ 0.69
SSBP4-212ENST00000601919 DENND4CQ5VZ89 1909 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 ANAPC1Q9H1A4 1944 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 SYNJ2BP-COX16A0A087WUM0 186 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 ZRANB2O95218 330 aaKnown RBP eCLIP19.34■□□□□ 0.69
SSBP4-212ENST00000601919 IGLV3-25P01717 112 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 F11P03951 625 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 PFKLP17858 780 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 TFE3P19532 575 aaPredicted RBP19.34■□□□□ 0.69
SSBP4-212ENST00000601919 GJC1P36383 396 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 PGFP49763 221 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 MTA1Q13330 715 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 ERMARDQ5T6L9 678 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 SEL1L2Q5TEA6 688 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 PRPF38BQ5VTL8 546 aaKnown RBP19.34■□□□□ 0.69
SSBP4-212ENST00000601919 RCOR2Q8IZ40 523 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 EXD1Q8NHP7 514 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 ADAM32Q8TC27 787 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 RNF34Q969K3 372 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms