RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 TMEM131Q92545 1883 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 TRABD2BA6NFA1 517 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 F8VP50 259 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 CILPO75339 1184 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 TNNC2P02585 160 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 KRT19P08727 400 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 HLA-EP13747 358 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 PLCG1P19174 1290 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 HNF1BP35680 557 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 GRIA4P48058 902 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 USP46P62068 366 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 CYP27A1Q02318 531 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 PDE4CQ08493 712 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 MESP2Q0VG99 397 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 MMRN1Q13201 1228 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 EIF4HQ15056 248 aaKnown RBP9.22□□□□□ -0.93
SMAD4-215ENST00000592911 TEAD4Q15561 434 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 PTPRNQ16849 979 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 LRRC69Q6ZNQ3 347 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 WDR49Q8IV35 697 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 CCDC83Q8IWF9 413 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 ZNF276Q8N554 614 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 SETD7Q8WTS6 366 aaKnown RBP9.22□□□□□ -0.93
SMAD4-215ENST00000592911 UCMAQ8WVF2 138 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 CAMK1GQ96NX5 476 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 FAM213AQ9BRX8 229 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 NUP58Q9BVL2 599 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 FBXO44Q9H4M3 255 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 PRORYQ9H606 182 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 GAREM1Q9H706 876 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 SMPD4Q9NXE4 827 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 FBXO10Q9UK96 956 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 TPX2Q9ULW0 747 aaKnown RBP9.22□□□□□ -0.93
SMAD4-215ENST00000592911 ZNF510Q9Y2H8 683 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 MYLKQ15746 1914 aa9.21□□□□□ -0.93
SMAD4-215ENST00000592911 YKT6O15498 198 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 RRP8O43159 456 aaKnown RBP9.21□□□□□ -0.94
SMAD4-215ENST00000592911 COCHO43405 550 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 DTNBO60941 627 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 NCAM1P13591 858 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 ATICP31939 592 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 GNL1P36915 607 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-215ENST00000592911 SNRPFP62306 86 aaKnown RBP9.21□□□□□ -0.94
SMAD4-215ENST00000592911 CYP4F3Q08477 520 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 MCM6Q14566 821 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 ANO4Q32M45 955 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 C6orf118Q5T5N4 469 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 EGFLAMQ63HQ2 1017 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 THSD4Q6ZMP0 1018 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 STXBP4Q6ZWJ1 553 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 TADA2BQ86TJ2 420 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 SFTPA1Q8IWL2 248 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 GPD1LQ8N335 351 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 C1orf216Q8TAB5 229 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 SNIP1Q8TAD8 396 aaKnown RBP9.21□□□□□ -0.94
SMAD4-215ENST00000592911 RHBDD1Q8TEB9 315 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 BAP1Q92560 729 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 IGSF8Q969P0 613 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 FBXO32Q969P5 355 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 TOE1Q96GM8 510 aaKnown RBP9.21□□□□□ -0.94
SMAD4-215ENST00000592911 MTMR12Q9C0I1 747 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 NRSN2Q9GZP1 204 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 SNX25Q9H3E2 840 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 ZHX3Q9H4I2 956 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 VRTNQ9H8Y1 702 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 MRPL44Q9H9J2 332 aaKnown RBP9.21□□□□□ -0.94
SMAD4-215ENST00000592911 PRDM16Q9HAZ2 1276 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 CYLDQ9NQC7 956 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 FSCN3Q9NQT6 498 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 DNAJC17Q9NVM6 304 aaKnown RBP9.21□□□□□ -0.94
SMAD4-215ENST00000592911 LSM7Q9UK45 103 aaKnown RBP9.21□□□□□ -0.94
SMAD4-215ENST00000592911 HCN2Q9UL51 889 aa9.21□□□□□ -0.94
SMAD4-215ENST00000592911 MUC22E2RYF6 1773 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-215ENST00000592911 FRMD3A2A2Y4 597 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 ZNF233A6NK53 670 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 TIMM44O43615 452 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 ABL1P00519 1130 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 PLA2G2AP14555 144 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 TYRP14679 529 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 PTPN1P18031 435 aaKnown RBP9.2□□□□□ -0.94
SMAD4-215ENST00000592911 TRIM21P19474 475 aaKnown RBP9.2□□□□□ -0.94
SMAD4-215ENST00000592911 ACO1P21399 889 aaKnown RBP9.2□□□□□ -0.94
SMAD4-215ENST00000592911 LMO2P25791 158 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 CLCN1P35523 988 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 DGKGP49619 791 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 CCT8P50990 548 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 PSMC1P62191 440 aaKnown RBP9.2□□□□□ -0.94
SMAD4-215ENST00000592911 ZBTB16Q05516 673 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 ILKQ13418 452 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 HLA-BQ31612 363 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 ZNF605Q86T29 641 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 TMEM25Q86YD3 366 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 MIB1Q86YT6 1006 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 BBS7Q8IWZ6 715 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 PARP9Q8IXQ6 854 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 ZCCHC9Q8N567 271 aaKnown RBP9.2□□□□□ -0.94
SMAD4-215ENST00000592911 PNPLA1Q8N8W4 532 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 B3GALNT2Q8NCR0 500 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 OR2I1PQ8NGU4 316 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 RASSF8Q8NHQ8 419 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms