RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 PHF24Q9UPV7 400 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 SF3B1O75533 1304 aaKnown RBP eCLIP10.81□□□□□ -0.689e-6■■■■■ 68.9
VPS25-203ENST00000589520 TLDC2A0PJX2 215 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 CASTOR2A6NHX0 329 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 E7ESA3 106 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 H3BRJ5 948 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 H7C0C1 242 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 MGEA5O60502 916 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 SPAG6O75602 509 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 TRPA1O75762 1119 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 PARNO95453 639 aaKnown RBP10.8□□□□□ -0.68
VPS25-203ENST00000589520 ZBED1O96006 694 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 SHBGP04278 402 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 CYP2F1P24903 491 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 RPL22P35268 128 aaKnown RBP10.8□□□□□ -0.68
VPS25-203ENST00000589520 MMP13P45452 471 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 ATP5OP48047 213 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 VPS41P49754 854 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 MAP3K7CLP57077 242 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 DAOAP59103 153 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 ADIGQ0VDE8 80 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 AUHQ13825 339 aaKnown RBP10.8□□□□□ -0.68
VPS25-203ENST00000589520 KYNUQ16719 465 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 INTS6LQ5JSJ4 861 aaKnown RBP10.8□□□□□ -0.68
VPS25-203ENST00000589520 LHX8Q68G74 356 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 PM20D1Q6GTS8 502 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 SH2D3CQ8N5H7 860 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 PQLC3Q8N755 202 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 APBB2Q92870 758 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 PCED1BQ96HM7 432 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 FAM118BQ9BPY3 351 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 OXCT2Q9BYC2 517 aaPredicted RBP10.8□□□□□ -0.68
VPS25-203ENST00000589520 BRD8Q9H0E9 1235 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 EPN3Q9H201 632 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 DHX35Q9H5Z1 703 aaKnown RBP10.8□□□□□ -0.68
VPS25-203ENST00000589520 SAYSD1Q9NPB0 183 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 KRT82Q9NSB4 513 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 TRMT13Q9NUP7 481 aaKnown RBP10.8□□□□□ -0.68
VPS25-203ENST00000589520 RNF19AQ9NV58 838 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 SAGE1Q9NXZ1 904 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 SENP1Q9P0U3 644 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 LGALS13Q9UHV8 139 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 SLC12A6Q9UHW9 1150 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 SLC24A2Q9UI40 661 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 PCDHB8Q9UN66 801 aa10.8□□□□□ -0.68
VPS25-203ENST00000589520 TRIP12Q14669 1992 aaPredicted RBP10.79□□□□□ -0.68
VPS25-203ENST00000589520 A0A1W2PQ45 241 aaPredicted RBP10.79□□□□□ -0.68
VPS25-203ENST00000589520 A0A1W2PQY0 241 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 MYBPHLA2RUH7 354 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 MEIS3P2A8K0S8 358 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 KBTBD13C9JR72 458 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 NCAM2O15394 837 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 HOXA2O43364 376 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 HCRTO43612 131 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 ATP2C2O75185 946 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 GCATO75600 419 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 ACSL3O95573 720 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 POMCP01189 267 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 INHAP05111 366 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 GSTA2P09210 222 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 PECAM1P16284 738 aaPredicted RBP10.79□□□□□ -0.68
VPS25-203ENST00000589520 ACAT1P24752 427 aaKnown RBP10.79□□□□□ -0.68
VPS25-203ENST00000589520 HPDP32754 393 aaPredicted RBP10.79□□□□□ -0.68
VPS25-203ENST00000589520 LSP1P33241 339 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 CYP2C18P33260 490 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 MAGEA6P43360 314 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 SARNPP82979 210 aaKnown RBP10.79□□□□□ -0.68
VPS25-203ENST00000589520 DEUP1Q05D60 604 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 SCAPQ12770 1279 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 HIF1AQ16665 826 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 DCAF6Q58WW2 860 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 ZC3H12AQ5D1E8 599 aaKnown RBP10.79□□□□□ -0.68
VPS25-203ENST00000589520 EFHC2Q5JST6 749 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 OVOS1Q6IE37 1185 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 LRRC31Q6UY01 552 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 B4GALNT4Q76KP1 1039 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 UNC45BQ8IWX7 931 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 DCP1BQ8IZD4 617 aaKnown RBP10.79□□□□□ -0.68
VPS25-203ENST00000589520 FAM71DQ8N9W8 422 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 ATP11CQ8NB49 1132 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 MCUQ8NE86 351 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 PCDH19Q8TAB3 1148 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 CLEC4CQ8WTT0 213 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 PYROXD1Q8WU10 500 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 CPT1BQ92523 772 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 FAM193BQ96PV7 902 aaPredicted RBP10.79□□□□□ -0.68
VPS25-203ENST00000589520 LPIN3Q9BQK8 851 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 BEGAINQ9BUH8 593 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 FAM107BQ9H098 131 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 KLC2Q9H0B6 622 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 USP29Q9HBJ7 922 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 DMAP1Q9NPF5 467 aaPredicted RBP10.79□□□□□ -0.68
VPS25-203ENST00000589520 TMEM161AQ9NX61 479 aa10.79□□□□□ -0.68
VPS25-203ENST00000589520 ZMYND8Q9ULU4 1186 aaPredicted RBP10.79□□□□□ -0.68
VPS25-203ENST00000589520 C5orf60A6NFR6 353 aa10.78□□□□□ -0.68
VPS25-203ENST00000589520 M0QYT0 321 aa10.78□□□□□ -0.68
VPS25-203ENST00000589520 SYN3O14994 580 aa10.78□□□□□ -0.68
VPS25-203ENST00000589520 STK10O94804 968 aaKnown RBP10.78□□□□□ -0.68
VPS25-203ENST00000589520 LTFP02788 710 aa10.78□□□□□ -0.68
VPS25-203ENST00000589520 ZSCAN5DPP0CG00 497 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms