RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 CC2D1AQ6P1N0 951 aaPredicted RBP13.21□□□□□ -0.3
RETREG3-203ENST00000585894 OLFML1Q6UWY5 402 aa13.21□□□□□ -0.3
RETREG3-203ENST00000585894 ZNF571Q7Z3V5 609 aaPredicted RBP13.21□□□□□ -0.3
RETREG3-203ENST00000585894 IPO4Q8TEX9 1081 aaKnown RBP13.21□□□□□ -0.3
RETREG3-203ENST00000585894 FAM83CQ9BQN1 747 aa13.21□□□□□ -0.3
RETREG3-203ENST00000585894 C11orf70Q9BRQ4 267 aa13.21□□□□□ -0.3
RETREG3-203ENST00000585894 THG1LQ9NWX6 298 aaKnown RBP13.21□□□□□ -0.3
RETREG3-203ENST00000585894 DUS2Q9NX74 493 aaKnown RBP13.21□□□□□ -0.3
RETREG3-203ENST00000585894 TAS2R14Q9NYV8 317 aa13.21□□□□□ -0.3
RETREG3-203ENST00000585894 AIPL1Q9NZN9 384 aa13.21□□□□□ -0.3
RETREG3-203ENST00000585894 ZDBF2Q9HCK1 2354 aa13.21□□□□□ -0.3
RETREG3-203ENST00000585894 SLC12A8A0AV02 714 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 TMEM221A6NGB7 291 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 M0R296 226 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 GJB6O95452 261 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 UNGP13051 313 aaPredicted RBP13.2□□□□□ -0.3
RETREG3-203ENST00000585894 NCAM1P13591 858 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 ZBED6P86452 979 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 KLHL30Q0D2K2 578 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 CLEC16AQ2KHT3 1053 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 HGSNATQ68CP4 663 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 KLHDC10Q6PID8 442 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 TMC6Q7Z403 805 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 XYLT1Q86Y38 959 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 FMNL3Q8IVF7 1028 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 BBS7Q8IWZ6 715 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 RNF139Q8WU17 664 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 GOLGA1Q92805 767 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 IRF7Q92985 503 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 ARHGEF3Q9NR81 526 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 ABCC13Q9NSE7 274 aa13.2□□□□□ -0.3
RETREG3-203ENST00000585894 LUC7L2Q9Y383 392 aaKnown RBP13.2□□□□□ -0.3
RETREG3-203ENST00000585894 TMCO5BA8MYB1 307 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 GREM1O60565 184 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 STC2O76061 302 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 KLKB1P03952 638 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 TCF3P15923 654 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 IFNAR2P48551 515 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 ZNF75DP51815 510 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 EML3Q32P44 896 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 SLC44A4Q53GD3 710 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 NAIF1Q69YI7 327 aaPredicted RBP13.19□□□□□ -0.3
RETREG3-203ENST00000585894 TPRG1Q6ZUI0 275 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 DEFB106AQ8N104 65 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 CSGALNACT1Q8TDX6 532 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 DQX1Q8TE96 717 aaKnown RBP13.19□□□□□ -0.3
RETREG3-203ENST00000585894 OSCP1Q8WVF1 389 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 C18orf8Q96DM3 657 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 WNT16Q9UBV4 365 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 SH3BP1Q9Y3L3 701 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.19□□□□□ -0.3
RETREG3-203ENST00000585894 SHISA7A6NL88 538 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 CCDC172P0C7W6 258 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 TNFAIP3P21580 790 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 MMP8P22894 467 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 PRKCIP41743 596 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 GABRB2P47870 512 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 ADKP55263 362 aaKnown RBP13.19□□□□□ -0.3
RETREG3-203ENST00000585894 RNASE9P60153 205 aaKnown RBP13.19□□□□□ -0.3
RETREG3-203ENST00000585894 YWHAZP63104 245 aaKnown RBP13.19□□□□□ -0.3
RETREG3-203ENST00000585894 SLC6A3Q01959 620 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 CENPCQ03188 943 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 PTP4A2Q12974 167 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 MLF2Q15773 248 aaPredicted RBP13.19□□□□□ -0.3
RETREG3-203ENST00000585894 TDRD12Q587J7 1177 aaKnown RBP13.19□□□□□ -0.3
RETREG3-203ENST00000585894 FAM102AQ5T9C2 384 aaPredicted RBP13.19□□□□□ -0.3
RETREG3-203ENST00000585894 TRIM72Q6ZMU5 477 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 TADA2BQ86TJ2 420 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 TAC4Q86UU9 113 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 ZNF276Q8N554 614 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 ZNF397Q8NF99 534 aaPredicted RBP13.19□□□□□ -0.3
RETREG3-203ENST00000585894 DNASE1L2Q92874 299 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 CHFRQ96EP1 664 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 CDK5RAP1Q96SZ6 601 aaKnown RBP13.19□□□□□ -0.3
RETREG3-203ENST00000585894 FOXQ1Q9C009 403 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 STRIP2Q9ULQ0 834 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 PIAS3Q9Y6X2 628 aa13.19□□□□□ -0.3
RETREG3-203ENST00000585894 ATG2BQ96BY7 2078 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 SYNJ2BP-COX16A0A087WUM0 186 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 E2F8A0AVK6 867 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 DDX3XO00571 662 aaKnown RBP eCLIP13.18□□□□□ -0.33e-16■■■■□ 25.4
RETREG3-203ENST00000585894 CAPN9O14815 690 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 SART1O43290 800 aaKnown RBP13.18□□□□□ -0.3
RETREG3-203ENST00000585894 TFE3P19532 575 aaPredicted RBP13.18□□□□□ -0.3
RETREG3-203ENST00000585894 NSFP46459 744 aaKnown RBP13.18□□□□□ -0.3
RETREG3-203ENST00000585894 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
RETREG3-203ENST00000585894 VCPP55072 806 aaKnown RBP13.18□□□□□ -0.3
RETREG3-203ENST00000585894 PFKPQ01813 784 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 RUNX3Q13761 415 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 DCAF6Q58WW2 860 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 TRNP1Q6NT89 227 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 MSANTD2Q6P1R3 559 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 TXNDC11Q6PKC3 985 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 DDX42Q86XP3 938 aaKnown RBP eCLIP13.18□□□□□ -0.3
RETREG3-203ENST00000585894 FLCNQ8NFG4 579 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 POPDC2Q9HBU9 364 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 METTL5Q9NRN9 209 aaKnown RBP13.18□□□□□ -0.3
RETREG3-203ENST00000585894 OLA1Q9NTK5 396 aaKnown RBP13.18□□□□□ -0.3
RETREG3-203ENST00000585894 COX16Q9P0S2 106 aa13.18□□□□□ -0.3
RETREG3-203ENST00000585894 HSF2BPO75031 334 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms