RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 SPEM2Q0P670 501 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 HTR4Q13639 388 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 MAPRE1Q15691 268 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 ARHGAP44Q17R89 818 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 SKOR2Q2VWA4 1001 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 FAM78AQ5JUQ0 283 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 VSTM1Q6UX27 236 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 SHC3Q92529 594 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 IRF7Q92985 503 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 SPATA17Q96L03 361 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 MYRFLQ96LU7 910 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 HEXIM2Q96MH2 286 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 NAP1L5Q96NT1 182 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 KXD1Q9BQD3 176 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 TTLL2Q9BWV7 592 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 LSM14BQ9BX40 385 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 C1QTNF1Q9BXJ1 281 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 SLC46A2Q9BY10 475 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 GSX2Q9BZM3 304 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 SMG9Q9H0W8 520 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 KCNK12Q9HB15 430 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 DNAJC12Q9UKB3 198 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 FNDC3AQ9Y2H6 1198 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 ASB3Q9Y575 518 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 PCDHB4Q9Y5E5 795 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 NUMBLQ9Y6R0 609 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 MYO15AQ9UKN7 3530 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 C2orf78A6NCI8 922 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 LGALS16A8MUM7 142 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 O00370 1275 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 FOXN3O00409 490 aaPredicted RBP10□□□□□ -0.81
NPLOC4-219ENST00000576713 PES1O00541 588 aaKnown RBP10□□□□□ -0.81
NPLOC4-219ENST00000576713 LETM1O95202 739 aaPredicted RBP10□□□□□ -0.81
NPLOC4-219ENST00000576713 TBXAS1P24557 533 aaPredicted RBP10□□□□□ -0.81
NPLOC4-219ENST00000576713 VIPR2P41587 438 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 SLC5A3P53794 718 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 RPL10AP62906 217 aaKnown RBP10□□□□□ -0.81
NPLOC4-219ENST00000576713 ZXDBP98169 803 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 IFRD2Q12894 506 aaPredicted RBP10□□□□□ -0.81
NPLOC4-219ENST00000576713 CCINQ13939 588 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 VEPH1Q14D04 833 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 SYCP1Q15431 976 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 GOLGA7BQ2TAP0 167 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 KLHDC7AQ5VTJ3 777 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 ARHGAP17Q68EM7 881 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 TXNDC8Q6A555 127 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 TANGO2Q6ICL3 276 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 DENND5BQ6ZUT9 1274 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 OTOP3Q7RTS5 596 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 ELMOD1Q8N336 334 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 UBA3Q8TBC4 463 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 ZNF775Q96BV0 537 aaPredicted RBP10□□□□□ -0.81
NPLOC4-219ENST00000576713 TRMT2BQ96GJ1 504 aaKnown RBP10□□□□□ -0.81
NPLOC4-219ENST00000576713 SMARCD1Q96GM5 515 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 ASB16Q96NS5 453 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 FAM129BQ96TA1 746 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 SLC30A3Q99726 388 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 ATXN3LQ9H3M9 355 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 DMAP1Q9NPF5 467 aaPredicted RBP10□□□□□ -0.81
NPLOC4-219ENST00000576713 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10□□□□□ -0.81
NPLOC4-219ENST00000576713 IL37Q9NZH6 218 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 CYTH4Q9UIA0 394 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 TSPAN16Q9UKR8 245 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 CCL26Q9Y258 94 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 NR2E1Q9Y466 385 aa10□□□□□ -0.81
NPLOC4-219ENST00000576713 FAM170AA1A519 330 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 FAM92AA1XBS5 289 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 DCXO43602 365 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 FAM200BP0CF97 657 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 CSH1P0DML2 217 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 CSH2P0DML3 217 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 KRT5P13647 590 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 UCHL3P15374 230 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 CD19P15391 556 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 MX2P20592 715 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 CETN1Q12798 172 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 TAF10Q12962 218 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 RNFT1Q5M7Z0 435 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 GPR158Q5T848 1215 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 CYP4A22Q5TCH4 519 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 DENND1BQ6P3S1 775 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 LRSAM1Q6UWE0 723 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 DNAJC14Q6Y2X3 702 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 BHLHA9Q7RTU4 235 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 ITIH5Q86UX2 942 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 NUP93Q8N1F7 819 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 SLC44A3Q8N4M1 653 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 ZSCAN18Q8TBC5 510 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 NDRG1Q92597 394 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 ACSF2Q96CM8 615 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 CYP2S1Q96SQ9 504 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 LRFN3Q9BTN0 628 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 DUSP16Q9BY84 665 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 NAT10Q9H0A0 1025 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 OSER1Q9NX31 292 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 COL4A2P08572 1712 aa9.99□□□□□ -0.81
NPLOC4-219ENST00000576713 ZNF840PA6NDX5 716 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 A6NHS1 94 aa9.98□□□□□ -0.81
NPLOC4-219ENST00000576713 PIK3R2O00459 728 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms