RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 LSM8O95777 96 aaKnown RBP13.6□□□□□ -0.23
CLK3-224ENST00000568605 ARSAP15289 507 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 TARSP26639 723 aaKnown RBP13.6□□□□□ -0.23
CLK3-224ENST00000568605 RPS9P46781 194 aaKnown RBP13.6□□□□□ -0.23
CLK3-224ENST00000568605 RPL34P49207 117 aaKnown RBP13.6□□□□□ -0.23
CLK3-224ENST00000568605 PGFP49763 221 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 KLK7P49862 253 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 JAM2P57087 298 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 ZXDBP98169 803 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 DGKKQ5KSL6 1271 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 IER5LQ5T953 404 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 BSPRYQ5W0U4 402 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 TOGARAM2Q6ZUX3 1019 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 PASD1Q8IV76 773 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 C1orf131Q8NDD1 294 aaKnown RBP13.6□□□□□ -0.23
CLK3-224ENST00000568605 TTC8Q8TAM2 541 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 EPS8L1Q8TE68 723 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 PLD4Q96BZ4 506 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 KLF16Q9BXK1 252 aaPredicted RBP13.6□□□□□ -0.23
CLK3-224ENST00000568605 SLC4A5Q9BY07 1137 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 IRF2BPLQ9H1B7 796 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 TSPY26PQ9H489 355 aa13.6□□□□□ -0.23
CLK3-224ENST00000568605 RTN4Q9NQC3 1192 aaKnown RBP13.6□□□□□ -0.23
CLK3-224ENST00000568605 CAPN9O14815 690 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 MDM4O15151 490 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 GFPT2O94808 682 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 TBX18O95935 607 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 CYP17A1P05093 508 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 CD72P21854 359 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 GJA4P35212 333 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 SOX9P48436 509 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 GRSF1Q12849 480 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLK3-224ENST00000568605 MSANTD2Q6P1R3 559 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 LRSAM1Q6UWE0 723 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 BHLHA9Q7RTU4 235 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 ZDHHC17Q8IUH5 632 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 CCDC26Q8TAB7 109 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 PPP1R13BQ96KQ4 1090 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 NUDT5Q9UKK9 219 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 MYO6Q9UM54 1294 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 HBS1LQ9Y450 684 aaKnown RBP13.59□□□□□ -0.23
CLK3-224ENST00000568605 ARIH1Q9Y4X5 557 aaPredicted RBP13.59□□□□□ -0.23
CLK3-224ENST00000568605 EML5Q05BV3 1969 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 DOCK4Q8N1I0 1966 aa13.59□□□□□ -0.23
CLK3-224ENST00000568605 SPAG17Q6Q759 2223 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.58□□□□□ -0.24
CLK3-224ENST00000568605 EPHB6O15197 1021 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 GALR2O43603 387 aaPredicted RBP13.58□□□□□ -0.24
CLK3-224ENST00000568605 DCNP07585 359 aaKnown RBP13.58□□□□□ -0.24
CLK3-224ENST00000568605 GLI1P08151 1106 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 ADH5P11766 374 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 NCAM1P13591 858 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 CDH5P33151 784 aaPredicted RBP13.58□□□□□ -0.24
CLK3-224ENST00000568605 HARS2P49590 506 aaKnown RBP13.58□□□□□ -0.24
CLK3-224ENST00000568605 GAD2Q05329 585 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 PON2Q15165 354 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 PREPLQ4J6C6 727 aaPredicted RBP13.58□□□□□ -0.24
CLK3-224ENST00000568605 TAF3Q5VWG9 929 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 TRIM72Q6ZMU5 477 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 HTR3DQ70Z44 454 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 BEND5Q7L4P6 421 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 TMEM110Q86TL2 294 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 BBS7Q8IWZ6 715 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 SYNPOQ8N3V7 929 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 DTWD2Q8NBA8 298 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 EDEM1Q92611 657 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 CD101Q93033 1021 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 SERPINB11Q96P15 392 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 POPDC2Q9HBU9 364 aa13.58□□□□□ -0.24
CLK3-224ENST00000568605 SLC12A8A0AV02 714 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 SCAMP3O14828 347 aaKnown RBP13.57□□□□□ -0.24
CLK3-224ENST00000568605 TEX33O43247 280 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 PAPSS1O43252 624 aaPredicted RBP13.57□□□□□ -0.24
CLK3-224ENST00000568605 HSF2BPO75031 334 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 STC2O76061 302 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 FERP16591 822 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 DRD1P21728 446 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 CORO1AP31146 461 aaKnown RBP13.57□□□□□ -0.24
CLK3-224ENST00000568605 CHKAP35790 457 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 EIF2DP41214 584 aaKnown RBP13.57□□□□□ -0.24
CLK3-224ENST00000568605 PTPN5P54829 565 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 UBASH3AP57075 661 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 ZNF445P59923 1031 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 FANCCQ00597 558 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 CDR2Q01850 454 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 NNTQ13423 1086 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 PPP2R5DQ14738 602 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 DHCR24Q15392 516 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 FBXO43Q4G163 708 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 EFHC1Q5JVL4 640 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 NUGGCQ68CJ6 796 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 NOP9Q86U38 636 aaKnown RBP13.57□□□□□ -0.24
CLK3-224ENST00000568605 SCUBE3Q8IX30 993 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 CLEC4CQ8WTT0 213 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 NDRG1Q92597 394 aaKnown RBP13.57□□□□□ -0.24
CLK3-224ENST00000568605 CLDN23Q96B33 292 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 IQCDQ96DY2 449 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 CPXM1Q96SM3 734 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 P2RY13Q9BPV8 354 aa13.57□□□□□ -0.24
CLK3-224ENST00000568605 CHRDQ9H2X0 955 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms