RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ULBP1Q9BZM6 244 aa15.39■□□□□ 0.05
FANCA-220ENST00000566409 GMEB2Q9UKD1 530 aa15.39■□□□□ 0.05
FANCA-220ENST00000566409 MMP17Q9ULZ9 603 aa15.39■□□□□ 0.05
FANCA-220ENST00000566409 PCDHB4Q9Y5E5 795 aa15.39■□□□□ 0.05
FANCA-220ENST00000566409 CNOT1A5YKK6 2376 aaKnown RBP15.38■□□□□ 0.05
FANCA-220ENST00000566409 SGK1O00141 431 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 DCLK1O15075 740 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 ADAM23O75077 832 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 GNA14O95837 355 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 ZBED1O96006 694 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 PAEPP09466 180 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 RALAP11233 206 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 TIE1P35590 1138 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 TNFRSF4P43489 277 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 YWHAGP61981 247 aaKnown RBP eCLIP15.38■□□□□ 0.05
FANCA-220ENST00000566409 BST2Q10589 180 aaKnown RBP15.38■□□□□ 0.05
FANCA-220ENST00000566409 EFEMP1Q12805 493 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 CRY1Q16526 586 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 LCLAT1Q6UWP7 414 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 TPGS1Q6ZTW0 290 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 CEP68Q76N32 757 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 IRF2BP1Q8IU81 584 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 PPM1KQ8N3J5 372 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 GPR161Q8N6U8 529 aaKnown RBP15.38■□□□□ 0.05
FANCA-220ENST00000566409 TXNDC5Q8NBS9 432 aaKnown RBP15.38■□□□□ 0.05
FANCA-220ENST00000566409 CCDC26Q8TAB7 109 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 SECISBP2LQ93073 1101 aaKnown RBP15.38■□□□□ 0.05
FANCA-220ENST00000566409 DLL3Q9NYJ7 618 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 MARK1Q9P0L2 795 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 KIAA1257Q9ULG3 409 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 THADAQ6YHU6 1953 aa15.38■□□□□ 0.05
FANCA-220ENST00000566409 YJEFN3A6XGL0 299 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.37■□□□□ 0.05
FANCA-220ENST00000566409 E7ENQ6 273 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 NEDD8-MDP1E9PL57 170 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 CACNG3O60359 315 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 KLF8O95600 359 aaPredicted RBP15.37■□□□□ 0.05
FANCA-220ENST00000566409 AFPP02771 609 aaKnown RBP15.37■□□□□ 0.05
FANCA-220ENST00000566409 TYRP14679 529 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 ZNF132P52740 706 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 SLC8A3P57103 927 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 GCNT1Q02742 428 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 ADIGQ0VDE8 80 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 RSPO4Q2I0M5 234 aaPredicted RBP15.37■□□□□ 0.05
FANCA-220ENST00000566409 BTBD8Q5XKL5 378 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 PMF1Q6P1K2 205 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 CACNA2D4Q7Z3S7 1137 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.37■□□□□ 0.05
FANCA-220ENST00000566409 RASSF3Q86WH2 238 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 TERB1Q8NA31 727 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 TSTD1Q8NFU3 115 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 SLC35F5Q8WV83 523 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 KCTD13Q8WZ19 329 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 ZC3H10Q96K80 434 aaKnown RBP15.37■□□□□ 0.05
FANCA-220ENST00000566409 BBS2Q9BXC9 721 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 SEMA4GQ9NTN9 838 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 DEC1Q9P2X7 70 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 RWDD2AQ9UIY3 292 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 RASAL2Q9UJF2 1139 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 LSM7Q9UK45 103 aaKnown RBP15.37■□□□□ 0.05
FANCA-220ENST00000566409 USP18Q9UMW8 372 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.37■□□□□ 0.05
FANCA-220ENST00000566409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.37■□□□□ 0.05
FANCA-220ENST00000566409 NUP205Q92621 2012 aa15.37■□□□□ 0.05
FANCA-220ENST00000566409 TBC1D3BA6NDS4 549 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 HMBSP08397 361 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 CISD3P0C7P0 127 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 CCDC192P0DO97 292 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 BRD2P25440 801 aaKnown RBP15.36■□□□□ 0.05
FANCA-220ENST00000566409 COG7P83436 770 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 GOLGA8FQ08AF8 430 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 GOLGA8DPQ0D2H9 430 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 CETN1Q12798 172 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 CNGA2Q16280 664 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 PLK5Q496M5 336 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 TOGARAM2Q6ZUX3 1019 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 TADA2BQ86TJ2 420 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 ARHGAP18Q8N392 663 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 RBBP8NLQ8NC74 664 aaPredicted RBP15.36■□□□□ 0.05
FANCA-220ENST00000566409 MDGA1Q8NFP4 955 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 CDK5RAP1Q96SZ6 601 aaKnown RBP15.36■□□□□ 0.05
FANCA-220ENST00000566409 TPSD1Q9BZJ3 242 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 INTS2Q9H0H0 1204 aaKnown RBP15.36■□□□□ 0.05
FANCA-220ENST00000566409 DUSP15Q9H1R2 295 aaPredicted RBP15.36■□□□□ 0.05
FANCA-220ENST00000566409 LRRC4Q9HBW1 653 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 PLK2Q9NYY3 685 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 MARCH2Q9P0N8 246 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 HESX1Q9UBX0 185 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 CNTN6Q9UQ52 1028 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 INVSQ9Y283 1065 aa15.36■□□□□ 0.05
FANCA-220ENST00000566409 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.36■□□□□ 0.05
FANCA-220ENST00000566409 PLXND1Q9Y4D7 1925 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 PRRT4C9JH25 899 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 PIK3R2O00459 728 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 LRP3O75074 770 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 SETSIPP0DME0 302 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 LCP1P13796 627 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 RGS7P49802 495 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 DGKEP52429 567 aa15.35■□□□□ 0.05
FANCA-220ENST00000566409 DAOAP59103 153 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms